Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89656 | Sorghum | nucleus | 76.23 | 73.81 |
| Zm00001d020837_P001 | Maize | nucleus | 77.87 | 71.7 |
| Zm00001d031278_P001 | Maize | nucleus | 44.26 | 45.0 |
| Zm00001d024790_P001 | Maize | nucleus | 21.31 | 21.22 |
| Zm00001d012703_P001 | Maize | nucleus | 19.26 | 21.08 |
| Zm00001d026628_P001 | Maize | nucleus, plastid | 18.03 | 20.85 |
| Zm00001d001824_P001 | Maize | nucleus | 17.21 | 20.59 |
| Zm00001d033325_P001 | Maize | nucleus, plastid | 25.41 | 19.75 |
| Zm00001d043904_P001 | Maize | nucleus | 18.44 | 19.65 |
| Zm00001d039482_P001 | Maize | nucleus | 18.44 | 19.48 |
| Zm00001d010740_P001 | Maize | nucleus | 16.8 | 19.34 |
| Zm00001d013724_P001 | Maize | nucleus | 25.41 | 18.51 |
| Zm00001d038693_P001 | Maize | nucleus | 17.21 | 18.18 |
| Zm00001d043402_P001 | Maize | nucleus | 18.44 | 17.31 |
| Zm00001d032999_P001 | Maize | nucleus | 25.0 | 13.56 |
| Zm00001d022525_P001 | Maize | nucleus | 27.05 | 12.82 |
| Zm00001d027846_P001 | Maize | nucleus | 21.72 | 12.27 |
| Zm00001d014198_P001 | Maize | nucleus | 21.72 | 12.21 |
| Zm00001d040362_P001 | Maize | nucleus | 23.36 | 9.97 |
| Zm00001d040455_P001 | Maize | nucleus | 20.9 | 9.94 |
Protein Annotations
| EntrezGene:100194004 | MapMan:15.5.1.5 | UniProt:A0A1D6ERS9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 |
| ProteinID:ONM22443.1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF67 | UniParc:UPI00022207E8 | EnsemblPlantsGene:Zm00001d005970 | EnsemblPlants:Zm00001d005970_P001 | EnsemblPlants:Zm00001d005970_T001 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
DNA binding with one finger2Dof zinc finger protein DOF1.6
Coordinates
chr2:+:194261659..194262393
Molecular Weight (calculated)
25339.3 Da
IEP (calculated)
9.666
GRAVY (calculated)
-0.645
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEEPGRRPV PPFAGVDLRR PKGYPVAVAK EEERPAPGGD PCPRCGSRDT KFCYYNNYNT SQPRHLCKSC RRYWTKGGSL RNVPVGGGTR KSSSSSSSSS
101: SSATTTSTSP GAAPKATKRS KNSKRRRVAP APDPAAPGTD ASTADVASTA PSAATVTASE KPSATEHAAA AVATEKPPAA LPVSVGAFAD TSPAPDAGSG
201: GVRELLPHPS RFEWPSGCDL GPPYWGWGTS VFADTDPALF LNLP
101: SSATTTSTSP GAAPKATKRS KNSKRRRVAP APDPAAPGTD ASTADVASTA PSAATVTASE KPSATEHAAA AVATEKPPAA LPVSVGAFAD TSPAPDAGSG
201: GVRELLPHPS RFEWPSGCDL GPPYWGWGTS VFADTDPALF LNLP
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.