Factsheet for Zm00001d012703_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043402_P001	Maize	nucleus	82.06	70.38
KXG33408	Sorghum	nucleus	79.82	68.46
TraesCS3A01G306800.1	Wheat	nucleus	54.71	60.4
HORVU3Hr1G072970.1	Barley	nucleus	54.26	59.9
TraesCS3B01G329700.1	Wheat	nucleus	54.26	59.31
Os01t0758200-01	Rice	nucleus	56.05	59.24
TraesCS3D01G295100.1	Wheat	nucleus	52.91	59.0
GSMUA_Achr2P09110_001	Banana	nucleus	28.7	53.78
GSMUA_Achr4P08020_001	Banana	nucleus	34.98	51.66
GSMUA_Achr4P15140_001	Banana	nucleus	33.63	50.34
GSMUA_Achr9P06430_001	Banana	nucleus	30.49	44.16
Zm00001d010740_P001	Maize	nucleus	39.91	41.98
Zm00001d038693_P001	Maize	nucleus	39.91	38.53
Zm00001d039482_P001	Maize	nucleus	23.32	22.51
Zm00001d043904_P001	Maize	nucleus	22.87	22.27
Zm00001d026628_P001	Maize	nucleus, plastid	20.63	21.8
Zm00001d001824_P001	Maize	nucleus	18.83	20.59
Zm00001d031278_P001	Maize	nucleus	21.08	19.58
Zm00001d005970_P001	Maize	nucleus	21.08	19.26
Zm00001d020837_P001	Maize	nucleus	21.52	18.11
Zm00001d024790_P001	Maize	nucleus	17.49	15.92
Zm00001d033325_P001	Maize	nucleus, plastid	21.97	15.61
Zm00001d032999_P001	Maize	nucleus	31.39	15.56
Zm00001d027846_P001	Maize	nucleus	29.6	15.28
Zm00001d013724_P001	Maize	nucleus	21.97	14.63
Zm00001d014198_P001	Maize	nucleus	27.35	14.06
Zm00001d040362_P001	Maize	nucleus	33.63	13.11
Zm00001d040455_P001	Maize	nucleus	29.15	12.67
Zm00001d022525_P001	Maize	nucleus	28.7	12.43

Protein Annotations

MapMan:15.5.1.5	ProteinID:AIB05530.1	ProteinID:AQL00366.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
UniProt:K7V4V2	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089
PANTHER:PTHR31089:SF14	UniParc:UPI000221A210	EnsemblPlantsGene:Zm00001d012703	EnsemblPlants:Zm00001d012703_P001	EnsemblPlants:Zm00001d012703_T001	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

C2C2-Dof-transcription factor 45Dof zinc finger protein DOF1.5

Coordinates

chr8:+:178952194..178952865

Molecular Weight (calculated)

24020.3 Da

IEP (calculated)

9.653

GRAVY (calculated)

-0.702

Length

223 amino acids

Sequence
(BLAST)

001: MVSHVEMGLA AGGFKLFGKV ITQCAESAPP ASLVARERDD PDERDQPVVK REAAAASDSD SAVVLVDKQR RSGGPAESED SKGQHHPRPR QPQQQDTAEA
101: RAAASAPPLP CPRCRSRNTK FCYFNNYNVN QPRHFCKDCH RYWTAGGALR NVPVGAGRRK NRPLGAAPIP LAVSVPAQHL QHPQHPAAAA GHGLGLPGQH
201: PSCPTSPSPA YAGRWPVCPD RRF

Best Arabidopsis Sequence Match ( AT2G34140.1 )
(BLAST)

001: MATQDSQGIK LFGKTIAFNT RTIKNEEETH PPEQEATIAV RSSSSSDLTA EKRPDKIIAC PRCKSMETKF CYFNNYNVNQ PRHFCKGCHR YWTAGGALRN
101: VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG SFRHDFPMKR LRCYSDGQSC

Arabidopsis Description

CDF4Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.