Factsheet for Zm00001d032999_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91636	Sorghum	nucleus	80.0	75.63
Zm00001d014198_P001	Maize	nucleus	58.44	60.6
Os10t0406300-01	Rice	nucleus	25.56	59.28
Zm00001d027846_P001	Maize	nucleus	47.56	49.54
Zm00001d012703_P001	Maize	nucleus	15.56	31.39
Zm00001d010740_P001	Maize	nucleus	14.0	29.72
Zm00001d038693_P001	Maize	nucleus	14.44	28.14
Zm00001d022525_P001	Maize	nucleus	30.89	26.99
Zm00001d043402_P001	Maize	nucleus	15.33	26.54
Zm00001d040362_P001	Maize	nucleus	33.33	26.22
Zm00001d040455_P001	Maize	nucleus	29.78	26.12
Zm00001d005970_P001	Maize	nucleus	13.56	25.0
Zm00001d031278_P001	Maize	nucleus	13.33	25.0
Zm00001d039482_P001	Maize	nucleus	12.22	23.81
Zm00001d020837_P001	Maize	nucleus	14.0	23.77
Zm00001d001824_P001	Maize	nucleus	10.67	23.53
Zm00001d026628_P001	Maize	nucleus, plastid	10.44	22.27
Zm00001d043904_P001	Maize	nucleus	11.11	21.83
Zm00001d033325_P001	Maize	nucleus, plastid	13.78	19.75
Zm00001d013724_P001	Maize	nucleus	13.33	17.91
Zm00001d024790_P001	Maize	nucleus	9.11	16.73

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1D6KVQ3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	ProteinID:ONM06582.1
PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	PANTHER:PTHR31089:SF12
UniParc:UPI000160964F	EnsemblPlantsGene:Zm00001d032999	EnsemblPlants:Zm00001d032999_P001	EnsemblPlants:Zm00001d032999_T001	InterPro:Znf_Dof	SEG:seg

Description

C2C2-Dof-transcription factor 40DOF40 C2C2-DOF type transcription factor

Coordinates

chr1:+:246355067..246357254

Molecular Weight (calculated)

47266.4 Da

IEP (calculated)

6.691

GRAVY (calculated)

-0.654

Length

450 amino acids

Sequence
(BLAST)

001: MVAECHGGGG AAAGGGDFLI KLFGMTIPVP ECGDAKDLQQ SKSNRWTEQD QDSHGLETAP APAHTDTSDP SPQPEVVDAE DPTETQQRPC NGDGDGDAAG
101: QREKLKKPDK VLPCPRCNSM DTKFCYFNNY NVNQPRHFCK NCQRYWTAGG AMRNVPVGAG RRKNKNAAAS HFFQRVRATN ATVLSFGGHG GAPPAARLDL
201: DLAEQLSHQL APVRSAGDAG RPCSEGSSSR DGNGSRSSVD EAAANADDGS VQQHPGPASM NSSGATVWPP YSCAPAPAAY FPQGIAIPIY PAAPAYWGCM
301: VPGAWSLPWP VQHPSSSSSP TTTSAPSVVS SSGAADDSSS HALGKRPRDR EGDDGRNGGN AKVWAPKSIR IDDVDEVARS SIWSLVGIKG DQTKQQDAAD
401: DHAGGHSKQL GTVFEPKRGE ATKKAMMTSS PLLHANPVAL TRSVAFQEGS

Best Arabidopsis Sequence Match ( AT3G47500.1 )
(BLAST)

001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI

Arabidopsis Description

CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.