Factsheet for Zm00001d014198_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032999_P001	Maize	nucleus	60.6	58.44
EER91636	Sorghum	nucleus	62.9	57.35
Os10t0406300-01	Rice	nucleus	20.51	45.88
Zm00001d027846_P001	Maize	nucleus	42.63	42.82
Zm00001d010740_P001	Maize	nucleus	14.06	28.77
Zm00001d012703_P001	Maize	nucleus	14.06	27.35
Zm00001d038693_P001	Maize	nucleus	14.52	27.27
Zm00001d022525_P001	Maize	nucleus	30.41	25.63
Zm00001d039482_P001	Maize	nucleus	12.9	24.24
Zm00001d043402_P001	Maize	nucleus	14.29	23.85
Zm00001d031278_P001	Maize	nucleus	12.9	23.33
Zm00001d040362_P001	Maize	nucleus	29.95	22.73
Zm00001d005970_P001	Maize	nucleus	12.21	21.72
Zm00001d026628_P001	Maize	nucleus, plastid	10.37	21.33
Zm00001d040455_P001	Maize	nucleus	25.12	21.25
Zm00001d020837_P001	Maize	nucleus	12.9	21.13
Zm00001d001824_P001	Maize	nucleus	9.91	21.08
Zm00001d043904_P001	Maize	nucleus	10.14	19.21
Zm00001d033325_P001	Maize	nucleus, plastid	12.67	17.52
Zm00001d013724_P001	Maize	nucleus	12.44	16.12
Zm00001d024790_P001	Maize	nucleus	8.99	15.92

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1D6GQZ6	ProteinID:AQK65537.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	PANTHER:PTHR31089:SF12
UniParc:UPI000182B7CA	EnsemblPlantsGene:Zm00001d014198	EnsemblPlants:Zm00001d014198_P001	EnsemblPlants:Zm00001d014198_T001	InterPro:Znf_Dof	SEG:seg

Description

Dof-type zinc finger DNA-binding family protein

Coordinates

chr5:+:36107594..36109905

Molecular Weight (calculated)

46181.7 Da

IEP (calculated)

8.958

GRAVY (calculated)

-0.664

Length

434 amino acids

Sequence
(BLAST)

001: MVAECQGGGD FLIKLFGKTI PVPEPEPESG DAKDLQQSSS NWTEIVDADD DPKKHSDGDA ARQREKLREP DKVLPCPRCN SADTKFCYFN NYNAKQPRHF
101: CKRCQRYWTA GGAMRNVPVG AGRRKNKNAA ASHSHLLHRT TTTANGAMLS FAPPGPGLAC LCLDLAAQFG HLAPVRDAAG TPSRPCTCSE GSTDRDGTSS
201: VVDESAASGD GPVQLHHHPA SVNTGWPPYS SPPPAAPYFS PGISIPVYPA APGYWGCMVP GAWSLPWPVQ PQPPSSRSQG QGLSSSSSPP PPTTTTIGTP
301: SVSSSSGAAD FDSHALGLGL GKHPRDRDGD DGRKRNGSAH GSGSAKVWAP KTIRIDDVDE VARSSIWSLV GVRGDREQQG AAAQVTSSGQ CSSPGACRPP
401: RRPWRQARRS FTPTPSRSRA RWRSMRALDF AIST

Best Arabidopsis Sequence Match ( AT5G39660.3 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.