Factsheet for Zm00001d024790_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013724_P001	Maize	nucleus	88.57	64.78
Zm00001d033325_P001	Maize	nucleus, plastid	68.57	53.5
EER91220	Sorghum	plastid	74.69	52.14
TraesCS4D01G080100.1	Wheat	nucleus	47.35	44.11
TraesCS4B01G081500.1	Wheat	nucleus	46.94	43.4
TraesCS4A01G234000.1	Wheat	nucleus	46.94	43.23
HORVU4Hr1G013890.1	Barley	nucleus	46.12	42.32
Zm00001d031278_P001	Maize	nucleus	27.35	27.92
GSMUA_Achr2P13350_001	Banana	nucleus	20.82	21.98
Zm00001d005970_P001	Maize	nucleus	21.22	21.31
Zm00001d020837_P001	Maize	nucleus	22.45	20.75
Zm00001d001824_P001	Maize	nucleus	17.14	20.59
Zm00001d043904_P001	Maize	nucleus	19.18	20.52
Zm00001d026628_P001	Maize	nucleus, plastid	17.55	20.38
Zm00001d010740_P001	Maize	nucleus	17.14	19.81
Zm00001d012703_P001	Maize	nucleus	15.92	17.49
Zm00001d039482_P001	Maize	nucleus	16.33	17.32
Zm00001d038693_P001	Maize	nucleus	15.92	16.88
Zm00001d043402_P001	Maize	nucleus	14.29	13.46
Zm00001d027846_P001	Maize	nucleus	18.78	10.65
Zm00001d040455_P001	Maize	nucleus	20.41	9.75
Zm00001d032999_P001	Maize	nucleus	16.73	9.11
Zm00001d014198_P001	Maize	nucleus	15.92	8.99
Zm00001d040362_P001	Maize	nucleus	18.78	8.04
Zm00001d022525_P001	Maize	nucleus	16.73	7.96

Protein Annotations

MapMan:15.5.1.5	ProteinID:AQK42024.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	UniProt:K7UGC9
PFAM:PD007478	PFAM:PF02701	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF81	UniParc:UPI000220979C
EnsemblPlantsGene:Zm00001d024790	EnsemblPlants:Zm00001d024790_P001	EnsemblPlants:Zm00001d024790_T001	InterPro:Znf_Dof	SEG:seg	:

Description

C2C2-Dof-transcription factor 15Dof zinc finger protein DOF1.6

Coordinates

chr10:-:88456372..88457198

Molecular Weight (calculated)

24948.3 Da

IEP (calculated)

9.017

GRAVY (calculated)

-0.154

Length

245 amino acids

Sequence
(BLAST)

001: MASFVPLLHN ACKHDVRHHL NTMPATWSGS TTNNVSATGA MAAATFGSTS NSNAAPSGAT DMASYLQQLQ DIAAAKSSGG GGAARGEQCP RCASHDTKFC
101: YYNTSQPRHF YRACRRYWTL GGSLRNVPIG GSTRKRPRLG QGGGGLLGSM FALGAAGLLL EGRGAGSSFD FDFDLGLGLP TGPLHLGAGA GAGAGEAAAL
201: QMQGLGLRGG GSAAGSSAFL WPAGAGMLVD NDSVDTWKLH RVSDA

Best Arabidopsis Sequence Match ( AT1G28310.2 )
(BLAST)

001: MFGNCDQNKK MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.