Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G080100.1 | Wheat | nucleus | 96.23 | 96.96 |
| TraesCS4A01G234000.1 | Wheat | nucleus | 96.6 | 96.24 |
| HORVU4Hr1G013890.1 | Barley | nucleus | 92.08 | 91.39 |
| Zm00001d024790_P001 | Maize | nucleus | 43.4 | 46.94 |
| Zm00001d033325_P001 | Maize | nucleus, plastid | 53.58 | 45.22 |
| Zm00001d013724_P001 | Maize | nucleus | 56.98 | 45.07 |
| EER91220 | Sorghum | plastid | 56.98 | 43.02 |
| TraesCS3B01G305400.1 | Wheat | nucleus | 17.36 | 29.87 |
| TraesCS2B01G592600.1 | Wheat | nucleus | 19.62 | 27.96 |
| TraesCS2B01G592900.1 | Wheat | nucleus | 20.75 | 26.57 |
| TraesCS2B01G592700.1 | Wheat | nucleus | 20.38 | 24.32 |
| TraesCS2B01G592800.1 | Wheat | nucleus, plastid | 19.25 | 24.06 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 20.75 | 23.71 |
| TraesCS3B01G329700.1 | Wheat | nucleus | 17.74 | 23.04 |
| TraesCS1B01G347400.1 | Wheat | plastid | 18.11 | 22.97 |
| TraesCS5B01G249800.1 | Wheat | nucleus | 23.02 | 21.71 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 18.49 | 21.3 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 21.51 | 13.16 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 21.51 | 11.9 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 22.26 | 10.95 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G081500.1 | EnsemblPlantsGene:TraesCS4B01G081500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF81 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr4B:-:79737184..79737981
Molecular Weight (calculated)
27853.3 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.272
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPLHQLAP MQQALLAHPQ NCKHDAAATM AATDMACVQQ QQQLLQLQPA AANPNTPSAA AREQCPRCAS HDTKFCYYNN YNTSQPRHFC RACRRYWTLG
101: GSLRNVPIGG STRKRLRPAP QQAMRRPPVH FGAPPPPMPA QSHSQQAPQG GLLSSLFALG GAPLFEGRVG FDLGLGLPGL SQVGLGGSAG EFGLHSLGLR
201: GGHAGTSAPM LWPTAFLDNG NVDTWKVSGG GAAAMWAPEF SSAPTVAQVG GNGMFHGGAQ IMGQL
101: GSLRNVPIGG STRKRLRPAP QQAMRRPPVH FGAPPPPMPA QSHSQQAPQG GLLSSLFALG GAPLFEGRVG FDLGLGLPGL SQVGLGGSAG EFGLHSLGLR
201: GGHAGTSAPM LWPTAFLDNG NVDTWKVSGG GAAAMWAPEF SSAPTVAQVG GNGMFHGGAQ IMGQL
001: MMTSSHQSNT TGFKPRRIKT TAKPPRQINN KEPSPATQPV LKCPRCDSVN TKFCYYNNYS LSQPRHYCKN CRRYWTRGGA LRNVPIGGST RNKNKPCSLQ
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL
Arabidopsis Description
DOF4.7Dof zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q0WQS4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.