Factsheet for Zm00001d033325_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91220	Sorghum	plastid	84.39	75.5
Zm00001d013724_P001	Maize	nucleus	77.07	72.24
Zm00001d024790_P001	Maize	nucleus	53.5	68.57
TraesCS4D01G080100.1	Wheat	nucleus	46.5	55.51
TraesCS4A01G234000.1	Wheat	nucleus	45.86	54.14
TraesCS4B01G081500.1	Wheat	nucleus	45.22	53.58
HORVU4Hr1G013890.1	Barley	nucleus	44.59	52.43
Zm00001d031278_P001	Maize	nucleus	22.93	30.0
Zm00001d020837_P001	Maize	nucleus	22.61	26.79
Zm00001d043904_P001	Maize	nucleus	18.79	25.76
GSMUA_Achr2P13350_001	Banana	nucleus	18.79	25.43
Zm00001d005970_P001	Maize	nucleus	19.75	25.41
Zm00001d010740_P001	Maize	nucleus	16.56	24.53
Zm00001d001824_P001	Maize	nucleus	15.61	24.02
Zm00001d026628_P001	Maize	nucleus, plastid	15.92	23.7
Zm00001d038693_P001	Maize	nucleus	16.56	22.51
Zm00001d012703_P001	Maize	nucleus	15.61	21.97
Zm00001d039482_P001	Maize	nucleus	15.92	21.64
Zm00001d043402_P001	Maize	nucleus	15.61	18.85
Zm00001d027846_P001	Maize	nucleus	21.02	15.28
Zm00001d032999_P001	Maize	nucleus	19.75	13.78
Zm00001d014198_P001	Maize	nucleus	17.52	12.67
Zm00001d040455_P001	Maize	nucleus	20.06	12.28
Zm00001d040362_P001	Maize	nucleus	20.7	11.36
Zm00001d022525_P001	Maize	nucleus	17.2	10.49

Protein Annotations

EntrezGene:100283109	MapMan:15.5.1.5	EMBL:BT060984	UniProt:C0HF78	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	ProteinID:ONM07243.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF81	UniParc:UPI000160964B	EnsemblPlantsGene:Zm00001d033325	EnsemblPlants:Zm00001d033325_P001	EnsemblPlants:Zm00001d033325_T001
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

C2C2-Dof-transcription factor 39Dof zinc finger protein DOF1.6

Coordinates

chr1:+:259066929..259067873

Molecular Weight (calculated)

31773.5 Da

IEP (calculated)

9.106

GRAVY (calculated)

-0.249

Length

314 amino acids

Sequence
(BLAST)

001: MAGQVMEAQA CRLQPPTMAP FAPLPHQYNN TCKHLNTTMA ATSGNNNSNG STATAAGGAA ADGMAAYLQH LQQAGAEAAA KSGGGGGAAR GEQCPRCASR
101: DTKFCYYNNY NTSQPRHFCR ACRRYWTLGG SLRNVPVGGS TRKRPRLAHH HQHARLAPPA PHVFGLTPMM PPPLQPSSST SSSQGQGQGQ GQSGGLLGSL
201: FALGAAGAGP PLLEGRGAGS SFDFDLGLGL PTGALHLGAA GQMQGLGLMG GGGASAAGSS SFLWPAAGLL VDNDSVDTWK MPGAAAGSMW PDFSFPAAAA
301: PQTAGLLHGG GHLM

Best Arabidopsis Sequence Match ( AT5G39660.1 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.