Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89656 | Sorghum | nucleus | 74.72 | 78.57 |
| Zm00001d005970_P001 | Maize | nucleus | 71.7 | 77.87 |
| Zm00001d031278_P001 | Maize | nucleus | 42.26 | 46.67 |
| Zm00001d033325_P001 | Maize | nucleus, plastid | 26.79 | 22.61 |
| Zm00001d024790_P001 | Maize | nucleus | 20.75 | 22.45 |
| Zm00001d043904_P001 | Maize | nucleus | 18.87 | 21.83 |
| Zm00001d012703_P001 | Maize | nucleus | 18.11 | 21.52 |
| Zm00001d026628_P001 | Maize | nucleus, plastid | 16.98 | 21.33 |
| Zm00001d001824_P001 | Maize | nucleus | 15.85 | 20.59 |
| Zm00001d013724_P001 | Maize | nucleus | 25.28 | 20.0 |
| Zm00001d039482_P001 | Maize | nucleus | 17.36 | 19.91 |
| Zm00001d010740_P001 | Maize | nucleus | 15.47 | 19.34 |
| Zm00001d043402_P001 | Maize | nucleus | 18.49 | 18.85 |
| Zm00001d038693_P001 | Maize | nucleus | 15.85 | 18.18 |
| Zm00001d032999_P001 | Maize | nucleus | 23.77 | 14.0 |
| Zm00001d027846_P001 | Maize | nucleus | 21.89 | 13.43 |
| Zm00001d014198_P001 | Maize | nucleus | 21.13 | 12.9 |
| Zm00001d022525_P001 | Maize | nucleus | 24.53 | 12.62 |
| Zm00001d040362_P001 | Maize | nucleus | 22.64 | 10.49 |
| Zm00001d040455_P001 | Maize | nucleus | 19.25 | 9.94 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A1D6I6L4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | ProteinID:ONM55710.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF67 |
| UniParc:UPI0008446978 | EnsemblPlantsGene:Zm00001d020837 | EnsemblPlants:Zm00001d020837_P001 | EnsemblPlants:Zm00001d020837_T001 | InterPro:Znf_Dof | SEG:seg |
Description
C2C2-Dof-transcription factor 16Dof zinc finger protein DOF1.6
Coordinates
chr7:+:134352325..134353122
Molecular Weight (calculated)
27025.2 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.541
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEPGRRPVP PFAGVDLRRP RGYPAPAAKE AEEEPAPAPA PGGDPCPRCG SRDTKFCYYN NYNTSQPRHF CKSCRRYWTK GGSLRNVPVG GGTRKSGSSS
101: SASASATPTS TGAAPKSPRS SKNSKRRRVG PAPAPDPAPA TATATADVAN TAPSTEAAAA TRAASEKPAA TEPAAATGAA SEKPAATELA AAVVSTEKPP
201: AAVGGFTDTS TTVPEIGLAD VCSGGVKELV PDPGHFEWPS GCDLGSYWGT SVFADTDPAL FLNLP
101: SASASATPTS TGAAPKSPRS SKNSKRRRVG PAPAPDPAPA TATATADVAN TAPSTEAAAA TRAASEKPAA TEPAAATGAA SEKPAATELA AAVVSTEKPP
201: AAVGGFTDTS TTVPEIGLAD VCSGGVKELV PDPGHFEWPS GCDLGSYWGT SVFADTDPAL FLNLP
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.