Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G119160.3 | Barley | nucleus, plastid | 82.8 | 74.04 |
| TraesCS2B01G592700.1 | Wheat | nucleus | 84.41 | 70.72 |
| HORVU2Hr1G119110.3 | Barley | nucleus | 79.57 | 69.48 |
| TraesCS2D01G563100.1 | Wheat | nucleus | 80.65 | 66.67 |
| TraesCS2B01G592900.1 | Wheat | nucleus | 74.19 | 66.67 |
| TraesCS2A01G591000.1 | Wheat | mitochondrion, nucleus | 86.02 | 64.26 |
| TraesCS2B01G592800.1 | Wheat | nucleus, plastid | 72.58 | 63.68 |
| Zm00001d001824_P001 | Maize | nucleus | 53.76 | 49.02 |
| Zm00001d026628_P001 | Maize | nucleus, plastid | 53.23 | 46.92 |
| EES13107 | Sorghum | nucleus | 55.91 | 46.43 |
| Os04t0678400-01 | Rice | plastid | 51.08 | 46.12 |
| TraesCS3B01G305400.1 | Wheat | nucleus | 22.04 | 26.62 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 29.57 | 23.91 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 30.65 | 23.85 |
| TraesCS1B01G347400.1 | Wheat | plastid | 24.73 | 22.01 |
| TraesCS3B01G329700.1 | Wheat | nucleus | 23.66 | 21.57 |
| TraesCS4B01G081500.1 | Wheat | nucleus | 27.96 | 19.62 |
| TraesCS5B01G249800.1 | Wheat | nucleus | 26.34 | 17.44 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 27.42 | 11.78 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 24.73 | 9.6 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 27.42 | 9.46 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G592600.1 | EnsemblPlantsGene:TraesCS2B01G592600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF31 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr2B:-:777521005..777521939
Molecular Weight (calculated)
20075.2 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.840
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPASAGAKR PFAADSAHDA AEQEQSLAQV QESAVSKKNG QSEQPKLECP RCSSTDTKFC YYNNYSTAQP RHYCRTCRRY WTHGGTLRKV PVGGACRRGS
101: GSSSKRRRPS AEPHTPSSGS PQPDQQEQDT LPPLPVFPFL TDGGPAFLPQ FDLGLYDGLA APTGAWEDFG GLELTWPPPP PPEAGN
101: GSSSKRRRPS AEPHTPSSGS PQPDQQEQDT LPPLPVFPFL TDGGPAFLPQ FDLGLYDGLA APTGAWEDFG GLELTWPPPP PPEAGN
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.