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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 4
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001824_P001 Maize nucleus 65.53 66.18
EES13107 Sorghum nucleus 67.96 62.5
Zm00001d026628_P001 Maize nucleus, plastid 63.11 61.61
TraesCS2D01G563000.1 Wheat nucleus, plastid 53.88 51.15
TraesCS2B01G592600.1 Wheat nucleus 46.12 51.08
TraesCS2A01G590700.1 Wheat nucleus 49.51 50.75
TraesCS2A01G591100.1 Wheat nucleus, plastid 51.94 50.71
TraesCS2D01G563400.1 Wheat nucleus 49.51 49.28
TraesCS2B01G592800.1 Wheat nucleus, plastid 50.49 49.06
TraesCS2B01G592700.1 Wheat nucleus 52.43 48.65
TraesCS2B01G592900.1 Wheat nucleus 48.54 48.31
TraesCS2D01G563200.1 Wheat plastid 50.97 47.51
HORVU2Hr1G119110.3 Barley nucleus 49.03 47.42
TraesCS2A01G590800.1 Wheat plastid 50.0 47.03
TraesCS2A01G591200.1 Wheat nucleus, plastid 48.06 46.26
HORVU2Hr1G119160.3 Barley nucleus, plastid 45.15 44.71
TraesCS2D01G563100.1 Wheat nucleus 48.06 44.0
TraesCS2A01G591000.1 Wheat mitochondrion, nucleus 50.0 41.37
GSMUA_Achr6P29500_001 Banana nucleus 27.67 23.85
Os01t0758200-01 Rice nucleus 21.84 21.33
Os09t0475800-01 Rice nucleus 22.33 20.0
Os10t0406300-01 Rice nucleus 18.45 19.59
Os08t0490100-01 Rice nucleus 21.84 16.3
Os01t0673700-00 Rice nucleus 18.45 11.55
Os03t0169600-01 Rice nucleus 23.3 10.91
Os01t0264000-01 Rice nucleus 25.24 10.48
Os07t0685000-02 Rice nucleus 23.3 10.08
Os01t0277500-01 Rice nucleus 23.3 8.66
Protein Annotations
MapMan:15.5.1.5ProteinID:BAS91647.1ProteinID:CAE54550.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR003851
EnsemblPlantsGene:Os04g0678400EnsemblPlants:Os04t0678400-01PFAM:PD007478PFAM:PF02701ScanProsite:PS01361PFscan:PS50884
PANTHER:PTHR31992PANTHER:PTHR31992:SF31UniProt:Q7FAN8UniParc:UPI00001B1747InterPro:Znf_DofSEG:seg
Description
DNA BINDING WITH ONE FINGER 17Zinc finger, Dof-type domain containing protein. (Os04t0678400-01)
Coordinates
chr4:-:34655316..34656735
Molecular Weight (calculated)
21647.9 Da
IEP (calculated)
8.116
GRAVY (calculated)
-0.509
Length
206 amino acids
Sequence
(BLAST)
001: MAPAVASSPS LVLSAAAATA SNKRPADSDA SPPHQGDRTG QQEKKQQQLE CPRCRSTNTK FCYYNNYSTS QPRHFCRACR RYWTHGGTLR DVPVGGASRR
101: GGGGKRRRVS ADADPSSASP PPPTTSTTDA YADLPAGFPF LSDGAFLPQF GLAGVAPAAF SWASAVPDLY NCGIAPWDDG TAVTGAAWDN FADIAGLDLS
201: WPPPGN
Best Arabidopsis Sequence Match ( AT5G66940.1 )
(BLAST)
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.