Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0758200-01 | Rice | nucleus | 29.38 | 27.01 |
| Zm00001d032999_P001 | Maize | nucleus | 59.28 | 25.56 |
| EER91636 | Sorghum | nucleus | 62.37 | 25.42 |
| Os03t0169600-01 | Rice | nucleus | 55.15 | 24.32 |
| Zm00001d014198_P001 | Maize | nucleus | 45.88 | 20.51 |
| Os04t0678400-01 | Rice | plastid | 19.59 | 18.45 |
| Os09t0475800-01 | Rice | nucleus | 21.13 | 17.83 |
| Os08t0490100-01 | Rice | nucleus | 21.13 | 14.86 |
| Os07t0685000-02 | Rice | nucleus | 33.51 | 13.66 |
| Os01t0264000-01 | Rice | nucleus | 34.54 | 13.51 |
| Os01t0673700-00 | Rice | nucleus | 22.68 | 13.37 |
| Os01t0277500-01 | Rice | nucleus | 37.63 | 13.18 |
Protein Annotations
| MapMan:15.5.1.5 | ProteinID:BAF26477.2 | ProteinID:BAT10775.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 |
| EnsemblPlantsGene:Os10g0406300 | EnsemblPlants:Os10t0406300-01 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31089 | PANTHER:PTHR31089:SF12 | UniProt:Q0IXW1 | UniParc:UPI0001B65EB8 | InterPro:Znf_Dof | SEG:seg |
Description
RICE DOF DAILY FLUCTUATIONS 3Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os10t0406300-01)
Coordinates
chr10:-:13882551..13885214
Molecular Weight (calculated)
20942.7 Da
IEP (calculated)
8.075
GRAVY (calculated)
-0.566
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGECRGGGGG GDGLIKLFGK TIPVQPDAKD VQQHSGSSSS STESDVQETA AVAVADPSPR SEVVDGESPP QPGGEAASHQ QQQKEMKLKK PDKILPCPRC
101: SSMDTKFCYF NNYNVNQPRH FCKHCQRYWT AGGAMRNVPV GAGVLGLHDS TSWSLEPPMA GHSPVSGHLI IITTYKCYTF SLLLHTRQAS QRGW
101: SSMDTKFCYF NNYNVNQPRH FCKHCQRYWT AGGAMRNVPV GAGVLGLHDS TSWSLEPPMA GHSPVSGHLI IITTYKCYTF SLLLHTRQAS QRGW
001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
Arabidopsis Description
CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.