Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G210300.1 | Wheat | nucleus | 67.14 | 61.78 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 66.53 | 61.34 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 65.73 | 60.48 |
| EES02731 | Sorghum | nucleus | 66.33 | 58.75 |
| Zm00001d040362_P001 | Maize | nucleus | 60.69 | 52.62 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 33.47 | 50.61 |
| Os07t0685000-02 | Rice | nucleus | 35.48 | 36.97 |
| Os10t0406300-01 | Rice | nucleus | 13.51 | 34.54 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 29.23 | 31.18 |
| CDY44994 | Canola | nucleus | 16.53 | 30.37 |
| KRH50577 | Soybean | nucleus | 29.03 | 30.06 |
| Os03t0169600-01 | Rice | nucleus | 26.61 | 30.0 |
| KRH70746 | Soybean | nucleus, plastid | 29.03 | 29.69 |
| KRH74885 | Soybean | nucleus | 28.43 | 29.44 |
| KRG89621 | Soybean | nucleus | 28.02 | 28.84 |
| Os01t0277500-01 | Rice | nucleus | 32.06 | 28.7 |
| Bra024683.1-P | Field mustard | nucleus | 18.75 | 28.44 |
| CDY16193 | Canola | nucleus | 18.75 | 28.44 |
| CDY50734 | Canola | nucleus | 14.92 | 27.31 |
| Os01t0758200-01 | Rice | nucleus | 11.49 | 27.01 |
| Os09t0475800-01 | Rice | nucleus | 12.5 | 26.96 |
| Bra016286.1-P | Field mustard | nucleus | 17.94 | 26.57 |
| CDY01768 | Canola | nucleus | 19.56 | 26.36 |
| CDX95919 | Canola | nucleus | 19.56 | 26.36 |
| CDY46443 | Canola | nucleus | 17.74 | 26.27 |
| CDY72477 | Canola | nucleus | 19.35 | 26.09 |
| Bra004396.1-P | Field mustard | nucleus | 19.35 | 26.09 |
| CDY67869 | Canola | nucleus | 20.16 | 25.97 |
| CDY07344 | Canola | nucleus | 20.16 | 25.91 |
| Bra003994.1-P | Field mustard | nucleus | 20.16 | 25.91 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 19.15 | 25.54 |
| AT1G69570.1 | Thale cress | nucleus | 20.36 | 25.31 |
| Os04t0678400-01 | Rice | plastid | 10.48 | 25.24 |
| CDY50735 | Canola | extracellular | 18.15 | 24.73 |
| Os08t0490100-01 | Rice | nucleus | 11.49 | 20.65 |
| Os01t0673700-00 | Rice | nucleus | 7.86 | 11.85 |
Protein Annotations
| MapMan:15.5.1.5 | ProteinID:BAD81249.1 | ProteinID:BAH91000.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 |
| EnsemblPlantsGene:Os01g0264000 | EnsemblPlants:Os01t0264000-01 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31089 | PANTHER:PTHR31089:SF1 | UniProt:Q5NBA7 | UniParc:UPI000049E6EF | InterPro:Znf_Dof | SEG:seg |
Description
RICE DOF DAILY FLUCTUATIONS 1, Dof-type zinc finger, Dof zinc factor 2, Dof transcription factor 2Dof transcription factor, Promotion of nutrient ion uptake and accumulation (Os01t0264000-01)
Coordinates
chr1:-:8949337..8951088
Molecular Weight (calculated)
54676.4 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.648
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVDVPQEEE DNEMKVDAPQ EKKDNEVTAD VPEEKGNDEM RVDASESIES IEPVSRSTLD NKKEDQGQMN NVEEKAASDS KDENEKTAND ESGQDKVLKK
101: PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGRRKSKSS SLHYRHLLMA PDCMMGSRVE ISKSMNPEAF ASAHSTPIQP
201: IGRNETVLKF GPEVPLCESM ASVLNIQEQN GTNAAAVPTG ENQEDNSCIS SITSHNVLPE NAAQVDKNST PVYCNGVGPV PQYYLGAPYM YPWNIGWNNV
301: PMMVPGTSMP ESASQSESCS TSSAPWMNMN SPMMPVASRL SAPPFPYPLV PPALWGCLSS WPATAWNIPW IRTNGGCMSP SSSSNSSCSG NGSPLGKHSR
401: DSSLPLKEDK EEKSLWVPKT LRIDDPDEAA KSSILASSSR SSPKVRAKAK QHQRLVLLVL LRQTQLHCRG RSRSRRLLDS LPVEFPIVFV STVCVL
101: PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGRRKSKSS SLHYRHLLMA PDCMMGSRVE ISKSMNPEAF ASAHSTPIQP
201: IGRNETVLKF GPEVPLCESM ASVLNIQEQN GTNAAAVPTG ENQEDNSCIS SITSHNVLPE NAAQVDKNST PVYCNGVGPV PQYYLGAPYM YPWNIGWNNV
301: PMMVPGTSMP ESASQSESCS TSSAPWMNMN SPMMPVASRL SAPPFPYPLV PPALWGCLSS WPATAWNIPW IRTNGGCMSP SSSSNSSCSG NGSPLGKHSR
401: DSSLPLKEDK EEKSLWVPKT LRIDDPDEAA KSSILASSSR SSPKVRAKAK QHQRLVLLVL LRQTQLHCRG RSRSRRLLDS LPVEFPIVFV STVCVL
001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
Arabidopsis Description
CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.