Factsheet for Os01t0673700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G271300.1	Wheat	nucleus	33.43	72.37
TraesCS3A01G271700.1	Wheat	nucleus	33.13	70.32
TraesCS3B01G305400.1	Wheat	nucleus	32.52	69.48
HORVU3Hr1G061840.2	Barley	nucleus, plastid	33.13	65.27
OQU87316	Sorghum	nucleus	30.7	60.12
Zm00001d043904_P001	Maize	nucleus	33.74	48.47
Os01t0758200-01	Rice	nucleus	15.5	24.17
Os10t0406300-01	Rice	nucleus	13.37	22.68
Os09t0475800-01	Rice	nucleus	14.89	21.3
Os08t0490100-01	Rice	nucleus	17.63	21.01
Os04t0678400-01	Rice	plastid	11.55	18.45
Os03t0169600-01	Rice	nucleus	15.2	11.36
Os01t0277500-01	Rice	nucleus	17.33	10.29
Os07t0685000-02	Rice	nucleus	12.77	8.82
Os01t0264000-01	Rice	nucleus	11.85	7.86

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A0N7KDH5	ProteinID:BAS73633.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
EnsemblPlantsGene:Os01g0673700	EnsemblPlants:Os01t0673700-00	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF5	UniParc:UPI000393AC07	InterPro:Znf_Dof	SEG:seg	:

Description

Dof zinc factor 5, Dof transcription factor 5Similar to Dof3 (Fragment). (Os01t0673700-00)

Coordinates

chr1:+:27676501..27681662

Molecular Weight (calculated)

34113.9 Da

IEP (calculated)

12.061

GRAVY (calculated)

-0.667

Length

329 amino acids

Sequence
(BLAST)

001: MANLPSTAAA AAADASGFKL FGKVIQPDGQ RGVEESAAAQ APPHPHPPAP PVMEAAAAAA GTSQTLQAAG GGGGGGGGGG GEPLPCPRCG SRETKFCYFN
101: NYNVRQPRHL CRSCRRYWTA GGALRRVASA SPGRRRPRPS AARSAAAAAA SASAASPPAA VPAASEGAES VDSRSRRCCP RGRGPPSPSS TCAAWASPAR
201: RRTPRAPSPS TTSAASSSAV SPSPASAPPA DPPPQQQPPP PRPPRRAAAA RRRRGRRRGR AATWRAKISL ARWGAESGES DPGRIRTGER ERDTPRGVAS
301: CVSVYYIRER LRSELRIAPN WSLNWSSFV

Best Arabidopsis Sequence Match ( AT2G34140.1 )
(BLAST)

001: MATQDSQGIK LFGKTIAFNT RTIKNEEETH PPEQEATIAV RSSSSSDLTA EKRPDKIIAC PRCKSMETKF CYFNNYNVNQ PRHFCKGCHR YWTAGGALRN
101: VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG SFRHDFPMKR LRCYSDGQSC

Arabidopsis Description

CDF4Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.