Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G251800.1 | Wheat | nucleus | 66.96 | 54.8 |
| TraesCS5B01G249800.1 | Wheat | nucleus | 66.52 | 54.45 |
| TraesCS5D01G259700.1 | Wheat | nucleus | 66.52 | 54.45 |
| Os08t0490100-01 | Rice | nucleus | 56.09 | 46.74 |
| Os04t0678400-01 | Rice | plastid | 20.0 | 22.33 |
| Os01t0758200-01 | Rice | nucleus | 20.0 | 21.8 |
| Os10t0406300-01 | Rice | nucleus | 17.83 | 21.13 |
| Os01t0673700-00 | Rice | nucleus | 21.3 | 14.89 |
| Os03t0169600-01 | Rice | nucleus | 24.35 | 12.73 |
| Os01t0264000-01 | Rice | nucleus | 26.96 | 12.5 |
| Os07t0685000-02 | Rice | nucleus | 25.65 | 12.39 |
| Os01t0277500-01 | Rice | nucleus | 20.0 | 8.3 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:9268074 | ProteinID:BAD46375.1 | ProteinID:BAH94614.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | EnsemblPlantsGene:Os09g0475800 | EnsemblPlants:Os09t0475800-01 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF67 | UniProt:Q651Z2 | UniParc:UPI00003FF4C2 | RefSeq:XP_015610919.1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
DNA BINDING WITH ONE FINGER 25Transcriptional activator, Regulation of the C4 photosynthesis gene, OsC4PPDK (Os09t0475800-01)
Coordinates
chr9:+:18234972..18235872
Molecular Weight (calculated)
23763.5 Da
IEP (calculated)
9.473
GRAVY (calculated)
-0.647
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEAGRRPAP QFAGVDLRRP KGYPAAAQLT PAAEEAAAGV GDPCPRCESR DTKFCYYNNY NTSQPRHFCK SCRRYWTKGG SLRNVPVGGG SRKSSTSSSS
101: AAAAAASSSS SPSSPAKSPK RSKNSKRRRV SPPPPQPVPA PPPPTTADAA DVAAPTAPEA TTKKAPEDLT AAAATQPAVA LGLGVADGGG GGKEHLDTSP
201: FEWPSGCDLG PYWPTGVFAD TDPSLFLNLP
101: AAAAAASSSS SPSSPAKSPK RSKNSKRRRV SPPPPQPVPA PPPPTTADAA DVAAPTAPEA TTKKAPEDLT AAAATQPAVA LGLGVADGGG GGKEHLDTSP
201: FEWPSGCDLG PYWPTGVFAD TDPSLFLNLP
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.