Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003994.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY67869 | Canola | nucleus | 92.49 | 92.73 |
| CDY01768 | Canola | nucleus | 74.09 | 77.72 |
| CDX95919 | Canola | nucleus | 73.83 | 77.45 |
| CDY72477 | Canola | nucleus | 73.32 | 76.9 |
| AT1G69570.1 | Thale cress | nucleus | 77.72 | 75.19 |
| CDY16193 | Canola | nucleus | 46.89 | 55.35 |
| CDY50735 | Canola | extracellular | 48.96 | 51.92 |
| CDY44994 | Canola | nucleus | 36.27 | 51.85 |
| CDY46443 | Canola | nucleus | 43.01 | 49.55 |
| CDY50734 | Canola | nucleus | 33.94 | 48.34 |
| CDY69084 | Canola | nucleus | 30.05 | 42.34 |
| CDY00286 | Canola | nucleus | 29.79 | 42.12 |
| CDY67518 | Canola | nucleus | 31.87 | 42.12 |
| CDY69244 | Canola | nucleus | 31.87 | 42.12 |
| CDY71347 | Canola | nucleus | 13.99 | 40.91 |
| CDX90171 | Canola | nucleus | 18.39 | 40.8 |
| CDY43321 | Canola | nucleus | 18.39 | 40.8 |
| CDX99791 | Canola | nucleus | 17.36 | 38.73 |
| CDY50789 | Canola | nucleus | 17.36 | 38.29 |
| CDY15647 | Canola | nucleus | 17.1 | 37.29 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 27.46 | 35.1 |
| CDY37670 | Canola | nucleus | 15.03 | 34.52 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 29.02 | 34.15 |
| CDY67393 | Canola | nucleus | 15.03 | 34.12 |
| CDY43923 | Canola | nucleus | 12.95 | 31.06 |
| CDY47405 | Canola | nucleus | 33.94 | 30.54 |
| KRH74885 | Soybean | nucleus | 37.82 | 30.48 |
| CDY66672 | Canola | nucleus | 33.68 | 30.45 |
| KRH70746 | Soybean | nucleus, plastid | 38.08 | 30.31 |
| KRH50577 | Soybean | nucleus | 36.79 | 29.65 |
| CDX74440 | Canola | nucleus | 32.38 | 29.48 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 29.02 | 28.79 |
| CDY37010 | Canola | nucleus | 29.02 | 28.72 |
| GSMUA_Achr11P... | Banana | nucleus | 31.09 | 28.5 |
| KRG89621 | Soybean | nucleus | 34.97 | 28.01 |
| CDY30261 | Canola | nucleus | 31.61 | 27.73 |
| CDX67434 | Canola | nucleus | 30.05 | 27.42 |
| CDY56923 | Canola | nucleus | 13.21 | 27.42 |
| CDY51457 | Canola | nucleus | 13.47 | 27.23 |
| CDY52832 | Canola | nucleus | 15.54 | 27.03 |
| CDX87836 | Canola | nucleus | 12.69 | 26.92 |
| CDY52953 | Canola | nucleus | 13.47 | 26.8 |
| CDY46544 | Canola | nucleus | 13.73 | 26.5 |
| CDY12790 | Canola | nucleus | 15.03 | 26.48 |
| CDY18628 | Canola | nucleus | 14.51 | 26.42 |
| CDY01450 | Canola | nucleus | 15.03 | 26.36 |
| CDY17783 | Canola | nucleus | 15.54 | 26.2 |
| CDY54696 | Canola | nucleus | 16.06 | 26.05 |
| CDX75689 | Canola | nucleus, plastid | 16.32 | 26.03 |
| CDY02086 | Canola | nucleus | 16.32 | 26.03 |
| CDY37299 | Canola | nucleus | 13.47 | 26.0 |
| CDX83127 | Canola | nucleus | 15.8 | 25.96 |
| CDY32420 | Canola | nucleus | 13.73 | 25.73 |
| CDY48879 | Canola | nucleus | 13.73 | 25.73 |
| CDX69349 | Canola | nucleus, plastid | 16.06 | 25.62 |
| CDX81350 | Canola | nucleus | 14.77 | 25.45 |
| CDY69021 | Canola | nucleus | 12.95 | 25.38 |
| CDY23010 | Canola | nucleus | 16.06 | 25.1 |
| CDY58082 | Canola | nucleus | 12.95 | 24.27 |
| CDY20892 | Canola | nucleus | 12.95 | 24.27 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 33.16 | 23.75 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 32.9 | 23.61 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 32.64 | 23.38 |
| EES02731 | Sorghum | nucleus | 33.16 | 22.86 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 27.46 | 22.8 |
| Zm00001d040362_P001 | Maize | nucleus | 32.9 | 22.2 |
| CDY17009 | Canola | nucleus | 12.95 | 21.74 |
| Os01t0264000-01 | Rice | nucleus | 25.91 | 20.16 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078F307 | UniProt:A0A078F307 | EnsemblPlants:CDY07344 | ProteinID:CDY07344 | ProteinID:CDY07344.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00124299001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | UniParc:UPI0002541975 | InterPro:Znf_Dof | SEG:seg |
Description
BnaA07g24230DBnaA07g24230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F307]
Coordinates
chrLK031978:+:52893..54832
Molecular Weight (calculated)
42622.2 Da
IEP (calculated)
9.002
GRAVY (calculated)
-0.857
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSRDIKLF GTTITSLSAV NHYDPSPLSA AHGGSDQSKE ASSSSSSSCS PSIRPDRVLA DKNEQESSRF KDPYTLSHLN EPPKAASEIL SPLSSKTNTD
101: QQSELTTTST SAADKPTTLK KPDKILPCPR CESANTKFCY YNNYNVSQPR YFCRNCQRYW TAGGSMRNVP VGSGRRKNKG WPSSNHYLHV TSEDYENNNN
201: LGTILSFGSS ESSVTETGKH QPGDTKITAD SASQQHQTGQ GFLPPQVMFP NNSSPWPYQW SPAGPNANFY PIPFYWGCTV PVWPTSETPT CLGKRSRDQT
301: QGGGMRDASI TTRERLVSET LSISEVTKTA VWSPKPERKT EGFSLFNGFE TKGSNRRSFV PETSINLQAN PAAMSRSMNF RENMQQ
101: QQSELTTTST SAADKPTTLK KPDKILPCPR CESANTKFCY YNNYNVSQPR YFCRNCQRYW TAGGSMRNVP VGSGRRKNKG WPSSNHYLHV TSEDYENNNN
201: LGTILSFGSS ESSVTETGKH QPGDTKITAD SASQQHQTGQ GFLPPQVMFP NNSSPWPYQW SPAGPNANFY PIPFYWGCTV PVWPTSETPT CLGKRSRDQT
301: QGGGMRDASI TTRERLVSET LSISEVTKTA VWSPKPERKT EGFSLFNGFE TKGSNRRSFV PETSINLQAN PAAMSRSMNF RENMQQ
001: MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS SCSPTIGPIR VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ
Arabidopsis Description
CDF5Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.