Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018141.1-P | Field mustard | nucleus | 96.5 | 96.96 |
| CDY66672 | Canola | nucleus | 96.5 | 96.96 |
| AT3G47500.1 | Thale cress | nucleus | 82.28 | 78.79 |
| CDY69244 | Canola | nucleus | 45.69 | 67.12 |
| CDY67518 | Canola | nucleus | 45.22 | 66.44 |
| CDY00286 | Canola | nucleus | 41.72 | 65.57 |
| CDY69084 | Canola | nucleus | 41.72 | 65.33 |
| KRH54567 | Soybean | nucleus | 50.58 | 47.38 |
| VIT_17s0000g06310.t01 | Wine grape | nucleus | 52.21 | 47.36 |
| KRH56903 | Soybean | nucleus | 52.21 | 47.36 |
| KRH03487 | Soybean | nucleus | 51.75 | 47.13 |
| KRH63324 | Soybean | nucleus | 50.35 | 45.96 |
| CDY71347 | Canola | nucleus | 13.52 | 43.94 |
| VIT_01s0026g02580.t01 | Wine grape | nucleus | 47.55 | 42.77 |
| Solyc03g115940.2.1 | Tomato | nucleus | 48.02 | 41.12 |
| CDX99791 | Canola | nucleus | 16.08 | 39.88 |
| CDX90171 | Canola | nucleus | 16.08 | 39.66 |
| CDY43321 | Canola | nucleus | 16.08 | 39.66 |
| CDY50789 | Canola | nucleus | 16.08 | 39.43 |
| PGSC0003DMT400050273 | Potato | nucleus | 46.15 | 39.36 |
| CDY15647 | Canola | nucleus | 15.62 | 37.85 |
| CDY67393 | Canola | nucleus | 14.92 | 37.65 |
| CDY37670 | Canola | nucleus | 14.69 | 37.5 |
| PGSC0003DMT400083080 | Potato | nucleus | 40.79 | 35.57 |
| EER95426 | Sorghum | nucleus | 34.97 | 35.38 |
| Solyc06g069760.2.1 | Tomato | nucleus | 40.09 | 34.96 |
| CDX95919 | Canola | nucleus | 29.84 | 34.78 |
| CDY01768 | Canola | nucleus | 29.84 | 34.78 |
| OQU90492 | Sorghum | nucleus | 39.16 | 34.71 |
| CDX74440 | Canola | nucleus | 34.27 | 34.67 |
| CDY16193 | Canola | nucleus | 26.34 | 34.56 |
| Os07t0685000-02 | Rice | nucleus | 38.0 | 34.24 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 34.5 | 34.18 |
| TraesCS2A01G100800.1 | Wheat | nucleus | 38.0 | 34.03 |
| CDY67869 | Canola | nucleus | 30.54 | 34.03 |
| CDY07344 | Canola | nucleus | 30.54 | 33.94 |
| HORVU4Hr1G074990.1 | Barley | nucleus | 34.97 | 33.94 |
| HORVU2Hr1G017290.1 | Barley | nucleus | 37.53 | 33.89 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 37.76 | 33.82 |
| CDY72477 | Canola | nucleus | 28.9 | 33.7 |
| TraesCS4A01G017700.1 | Wheat | nucleus | 34.27 | 33.64 |
| Os03t0169600-01 | Rice | nucleus | 34.5 | 33.64 |
| CDX67434 | Canola | nucleus | 33.1 | 33.57 |
| Zm00001d027846_P001 | Maize | nucleus | 33.8 | 33.56 |
| TraesCS4D01G285100.1 | Wheat | nucleus | 34.5 | 33.48 |
| CDY30261 | Canola | nucleus | 34.03 | 33.18 |
| CDY37010 | Canola | nucleus | 30.07 | 33.08 |
| TraesCS2D01G100300.1 | Wheat | mitochondrion, nucleus | 38.0 | 32.53 |
| Zm00001d022525_P001 | Maize | nucleus | 38.23 | 31.84 |
| CDY44994 | Canola | nucleus | 19.81 | 31.48 |
| CDY50735 | Canola | extracellular | 26.57 | 31.32 |
| CDY43923 | Canola | nucleus | 11.65 | 31.06 |
| CDY46443 | Canola | nucleus | 24.01 | 30.75 |
| CDY50734 | Canola | nucleus | 19.11 | 30.26 |
| CDY52832 | Canola | nucleus | 15.38 | 29.73 |
| CDY56923 | Canola | nucleus | 12.82 | 29.57 |
| CDX69349 | Canola | nucleus, plastid | 16.55 | 29.34 |
| CDX75689 | Canola | nucleus, plastid | 16.08 | 28.51 |
| CDY51457 | Canola | nucleus | 12.35 | 27.75 |
| CDX83127 | Canola | nucleus | 15.15 | 27.66 |
| CDY17783 | Canola | nucleus | 14.69 | 27.51 |
| CDY54696 | Canola | nucleus | 15.15 | 27.31 |
| CDY02086 | Canola | nucleus | 15.38 | 27.27 |
| CDX87836 | Canola | nucleus | 11.42 | 26.92 |
| CDY23010 | Canola | nucleus | 15.38 | 26.72 |
| CDY18628 | Canola | nucleus | 13.05 | 26.42 |
| CDY69021 | Canola | nucleus | 12.12 | 26.4 |
| CDY01450 | Canola | nucleus | 13.52 | 26.36 |
| CDY52953 | Canola | nucleus | 11.89 | 26.29 |
| CDY48879 | Canola | nucleus | 12.59 | 26.21 |
| CDY32420 | Canola | nucleus | 12.59 | 26.21 |
| CDY37299 | Canola | nucleus | 12.12 | 26.0 |
| CDY20892 | Canola | nucleus | 12.35 | 25.73 |
| CDY58082 | Canola | nucleus | 12.35 | 25.73 |
| CDY12790 | Canola | nucleus | 13.05 | 25.57 |
| CDY46544 | Canola | nucleus | 11.89 | 25.5 |
| CDX81350 | Canola | nucleus | 13.29 | 25.45 |
| CDY17009 | Canola | nucleus | 12.59 | 23.48 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078I8Z1 | UniProt:A0A078I8Z1 | EnsemblPlants:CDY47405 | ProteinID:CDY47405 | ProteinID:CDY47405.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00087312001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF7 | UniParc:UPI0004EF2374 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng15140DBnaCnng15140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8Z1]
Coordinates
chrLK032714:+:71082..73111
Molecular Weight (calculated)
47185.1 Da
IEP (calculated)
8.914
GRAVY (calculated)
-0.906
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMESRDPAI KLFGMKIPFP AVFEPTTAVT LEEDYSGGDD KSPEKVTTEQ ATPEKKNNCN NKSLNNSNDS KPETGDKEEA TSTDQIESDE TNQQTTADGK
101: TLKKPTKILP CPRCKSMDTK FCYYNNYNIN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK HKSSSSHYRH ITISEALQAA RLDPGLQSNT RVLSFGLQAP
201: PHQQHVAPMT PVMKLQGDQK VSNGARNGLA ARVENGDDCS SGSSVTTSVD ETRAQSCRVV EPQVNNNMNG YACIPGVPWP YTWNPAMPQP GFYPPPGYPM
301: PFYPYWTIPM APPNQSSSPM SQKGSSSNSP TLGKHSRDED SSTERKQRNG CVIVPKTLRI DDPNEAAKSS IWTTLGIKNE GSTLGSKGGM FKGFDQKTNK
401: SNKDQTDNSP VRSANPAALS RSLNFQERV
101: TLKKPTKILP CPRCKSMDTK FCYYNNYNIN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK HKSSSSHYRH ITISEALQAA RLDPGLQSNT RVLSFGLQAP
201: PHQQHVAPMT PVMKLQGDQK VSNGARNGLA ARVENGDDCS SGSSVTTSVD ETRAQSCRVV EPQVNNNMNG YACIPGVPWP YTWNPAMPQP GFYPPPGYPM
301: PFYPYWTIPM APPNQSSSPM SQKGSSSNSP TLGKHSRDED SSTERKQRNG CVIVPKTLRI DDPNEAAKSS IWTTLGIKNE GSTLGSKGGM FKGFDQKTNK
401: SNKDQTDNSP VRSANPAALS RSLNFQERV
001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
Arabidopsis Description
CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.