Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20892 | Canola | nucleus | 97.57 | 97.57 |
| Bra015609.1-P | Field mustard | nucleus | 100.0 | 92.38 |
| AT1G47655.1 | Thale cress | nucleus | 78.64 | 77.51 |
| CDY17009 | Canola | nucleus | 79.13 | 70.87 |
| VIT_18s0001g11310.t01 | Wine grape | nucleus | 44.17 | 40.27 |
| CDY52832 | Canola | nucleus | 38.35 | 35.59 |
| CDY56923 | Canola | nucleus | 31.07 | 34.41 |
| CDX83127 | Canola | nucleus | 38.84 | 34.04 |
| CDY17783 | Canola | nucleus | 37.38 | 33.62 |
| CDY54696 | Canola | nucleus | 38.84 | 33.61 |
| CDY51457 | Canola | nucleus | 31.07 | 33.51 |
| CDY37299 | Canola | nucleus | 32.52 | 33.5 |
| CDY18628 | Canola | nucleus | 34.47 | 33.49 |
| CDX81350 | Canola | nucleus | 35.92 | 33.04 |
| CDY02086 | Canola | nucleus | 37.86 | 32.23 |
| Solyc04g079570.1.1 | Tomato | nucleus | 37.38 | 32.22 |
| CDY69021 | Canola | nucleus | 30.58 | 31.98 |
| CDY12790 | Canola | nucleus | 33.98 | 31.96 |
| CDY01450 | Canola | nucleus | 33.98 | 31.82 |
| CDY71347 | Canola | nucleus | 20.39 | 31.82 |
| CDY43923 | Canola | nucleus | 24.76 | 31.68 |
| CDY23010 | Canola | nucleus | 37.86 | 31.58 |
| CDY52953 | Canola | nucleus | 29.61 | 31.44 |
| CDY32420 | Canola | nucleus | 30.58 | 30.58 |
| CDY48879 | Canola | nucleus | 30.58 | 30.58 |
| CDX87836 | Canola | nucleus | 26.7 | 30.22 |
| CDY46544 | Canola | nucleus | 29.13 | 30.0 |
| PGSC0003DMT400030496 | Potato | nucleus | 28.16 | 29.59 |
| KXG31638 | Sorghum | nucleus | 33.5 | 29.36 |
| Zm00001d039482_P001 | Maize | nucleus | 31.07 | 27.71 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 30.1 | 26.96 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 30.1 | 26.96 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 29.13 | 25.21 |
| CDY15647 | Canola | nucleus | 21.36 | 24.86 |
| CDX99791 | Canola | nucleus | 20.87 | 24.86 |
| CDY50789 | Canola | nucleus | 20.87 | 24.57 |
| CDX90171 | Canola | nucleus | 20.39 | 24.14 |
| CDY37670 | Canola | nucleus | 19.42 | 23.81 |
| CDY43321 | Canola | nucleus | 19.9 | 23.56 |
| CDY67393 | Canola | nucleus | 19.42 | 23.53 |
| CDX75689 | Canola | nucleus, plastid | 27.18 | 23.14 |
| CDX69349 | Canola | nucleus, plastid | 26.7 | 22.73 |
| CDY69084 | Canola | nucleus | 24.27 | 18.25 |
| CDY00286 | Canola | nucleus | 23.79 | 17.95 |
| CDY69244 | Canola | nucleus | 25.24 | 17.81 |
| CDY67518 | Canola | nucleus | 24.27 | 17.12 |
| CDY44994 | Canola | nucleus | 21.36 | 16.3 |
| CDY50734 | Canola | nucleus | 20.87 | 15.87 |
| CDY46443 | Canola | nucleus | 22.82 | 14.03 |
| CDX95919 | Canola | nucleus | 24.76 | 13.86 |
| CDY16193 | Canola | nucleus | 21.84 | 13.76 |
| CDY01768 | Canola | nucleus | 24.27 | 13.59 |
| CDY37010 | Canola | nucleus | 25.24 | 13.33 |
| CDY72477 | Canola | nucleus | 23.79 | 13.32 |
| CDY50735 | Canola | extracellular | 23.3 | 13.19 |
| CDY07344 | Canola | nucleus | 24.27 | 12.95 |
| CDX74440 | Canola | nucleus | 26.21 | 12.74 |
| CDY67869 | Canola | nucleus | 23.79 | 12.73 |
| CDY66672 | Canola | nucleus | 25.73 | 12.41 |
| CDY47405 | Canola | nucleus | 25.73 | 12.35 |
| CDX67434 | Canola | nucleus | 25.24 | 12.29 |
| CDY30261 | Canola | nucleus | 26.21 | 12.27 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078J5M2 | UniProt:A0A078J5M2 | EnsemblPlants:CDY58082 | ProteinID:CDY58082 | ProteinID:CDY58082.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00023062001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF77 | UniParc:UPI0004EEE777 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g28590DBnaA10g28590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5M2]
Coordinates
chrLK033633:+:7639..8310
Molecular Weight (calculated)
21720.1 Da
IEP (calculated)
8.088
GRAVY (calculated)
-0.510
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSESNQTRS ARVQGSTAAY PPPNLAEPLP CPRCNSIITK FCYYNNYNLL QPRYFCKSCR RYWTQGGTLR DVPVGGGTRR SSSKRNRSFS SNATTASSSS
101: CSSSIITTAN GSEPMNQGTA TNEAKGSHEI SGYGSFASLG SGGLDYGFGY GYGLEELSIG YLGGGSGVEI PVVGGGDTWQ IGEIEAKSGD SLWPGLEISM
201: QSNGAK
101: CSSSIITTAN GSEPMNQGTA TNEAKGSHEI SGYGSFASLG SGGLDYGFGY GYGLEELSIG YLGGGSGVEI PVVGGGDTWQ IGEIEAKSGD SLWPGLEISM
201: QSNGAK
001: MPSEPNQTRP TRVQPSTAAY PPPNLAEPLP CPRCNSTTTK FCYYNNYNLA QPRYYCKSCR RYWTQGGTLR DVPVGGGTRR SSSKRHRSFS TTATSSSSSS
101: SVITTTTQEP ATTEASQTKV TNLISGHGSF ASLLGLGSGN GGLDYGFGYG YGLEEMSIGY LGDSSVGEIP VVDGCGGDTW QIGEIEGKSG GDSLIWPGLE
201: ISMQTNDVK
101: SVITTTTQEP ATTEASQTKV TNLISGHGSF ASLLGLGSGN GGLDYGFGYG YGLEEMSIGY LGDSSVGEIP VVDGCGGDTW QIGEIEGKSG GDSLIWPGLE
201: ISMQTNDVK
Arabidopsis Description
DOF1.6Dof zinc finger protein DOF1.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.