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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75689 Canola nucleus, plastid 95.87 95.87
AT4G38000.1 Thale cress nucleus, plastid 74.38 73.17
CDY43923 Canola nucleus 22.31 33.54
Solyc06g062520.1.1 Tomato nucleus 26.45 33.33
CDY71347 Canola nucleus 18.18 33.33
GSMUA_Achr7P09590_001 Banana nucleus 26.45 32.65
CDY56923 Canola nucleus 23.55 30.65
CDY51457 Canola nucleus 23.97 30.37
PGSC0003DMT400006421 Potato nucleus 26.03 30.29
CDX87836 Canola nucleus 22.73 30.22
CDY37299 Canola nucleus 23.97 29.0
CDY69021 Canola nucleus 23.55 28.93
CDX99791 Canola nucleus 20.66 28.9
CDY48879 Canola nucleus 24.38 28.64
CDY32420 Canola nucleus 24.38 28.64
CDY50789 Canola nucleus 20.66 28.57
GSMUA_Achr10P... Banana nucleus 26.86 28.51
CDY52832 Canola nucleus 25.62 27.93
CDY52953 Canola nucleus 22.31 27.84
CDY15647 Canola nucleus 20.25 27.68
CDY46544 Canola nucleus 22.73 27.5
CDX90171 Canola nucleus 19.42 27.01
CDY43321 Canola nucleus 19.42 27.01
GSMUA_Achr4P30860_001 Banana nucleus 26.03 26.92
GSMUA_Achr2P15700_001 Banana nucleus 24.79 26.79
CDY20892 Canola nucleus 22.73 26.7
CDY58082 Canola nucleus 22.73 26.7
CDY17783 Canola nucleus 24.79 26.2
CDY02086 Canola nucleus 26.03 26.03
CDY18628 Canola nucleus 22.73 25.94
CDY12790 Canola nucleus 23.14 25.57
CDX83127 Canola nucleus 24.79 25.53
CDY23010 Canola nucleus 26.03 25.51
CDY01450 Canola nucleus 23.14 25.45
CDY54696 Canola nucleus 24.79 25.21
CDY37670 Canola nucleus 17.36 25.0
CDY17009 Canola nucleus 23.55 24.78
CDY67393 Canola nucleus 17.36 24.71
CDX81350 Canola nucleus 22.31 24.11
CDY69084 Canola nucleus 24.38 21.53
CDY69244 Canola nucleus 25.21 20.89
CDY00286 Canola nucleus 23.55 20.88
CDY67518 Canola nucleus 24.79 20.55
CDY16193 Canola nucleus 23.14 17.13
CDY66672 Canola nucleus 29.75 16.86
CDX95919 Canola nucleus 25.21 16.58
CDY47405 Canola nucleus 29.34 16.55
CDY01768 Canola nucleus 24.79 16.3
CDY72477 Canola nucleus 24.79 16.3
CDY07344 Canola nucleus 25.62 16.06
CDY44994 Canola nucleus 17.77 15.93
CDY37010 Canola nucleus 25.21 15.64
CDY67869 Canola nucleus 24.79 15.58
CDY50735 Canola extracellular 23.14 15.38
CDX74440 Canola nucleus 26.45 15.09
CDY30261 Canola nucleus 26.86 14.77
CDY50734 Canola nucleus 16.53 14.76
CDX67434 Canola nucleus 25.62 14.66
CDY46443 Canola nucleus 19.01 13.73
Protein Annotations
MapMan:15.5.1.5GO:A0A078BZG0EnsemblPlants:CDX69349ProteinID:CDX69349ProteinID:CDX69349.1GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00131197001InterPro:IPR003851PFAM:PD007478
PFAM:PF02701ScanProsite:PS01361PFscan:PS50884PANTHER:PTHR31992PANTHER:PTHR31992:SF61UniParc:UPI0004EC2E1B
InterPro:Znf_DofSEG:seg::::
Description
BnaC01g01040D
Coordinates
chrLK031789:+:4325704..4326432
Molecular Weight (calculated)
27108.8 Da
IEP (calculated)
9.719
GRAVY (calculated)
-0.737
Length
242 amino acids
Sequence
(BLAST)
001: MMTSSHQSHT TSFNPRRIKT KAKPPHQISH MRPSPAAQPV LKCPRCDSVN TKFCYYNNYS LSQPRHYCKN CRRYWTRGGT LRNVPIGGST RNKNKPSSLQ
101: VISSPPPIVA PLSSHELVDG FRMNRAMIDP SSTAFPGGFS GYMFSLDPNY NLASSSIESL SSLNQDLHQK LQQQRLFTSM FQQDSPPVMF HNVELLPPST
201: ATTEWAFDRS AIGEATSGSN ENNGEREGNL GSWYYNPNNS MP
Best Arabidopsis Sequence Match ( AT4G38000.1 )
(BLAST)
001: MMTSSHQSNT TGFKPRRIKT TAKPPRQINN KEPSPATQPV LKCPRCDSVN TKFCYYNNYS LSQPRHYCKN CRRYWTRGGA LRNVPIGGST RNKNKPCSLQ
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL
Arabidopsis Description
DOF4.7Dof zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q0WQS4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.