Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P09590_001 | Banana | nucleus | 72.81 | 84.69 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 72.37 | 73.66 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 66.67 | 64.96 |
| KRH47156 | Soybean | nucleus | 48.25 | 52.13 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 47.37 | 50.0 |
| CDY56923 | Canola | nucleus | 40.35 | 49.46 |
| KRH09992 | Soybean | nucleus | 45.61 | 49.29 |
| Solyc06g062520.1.1 | Tomato | nucleus | 41.23 | 48.96 |
| KRH44186 | Soybean | nucleus | 45.61 | 48.83 |
| Bra031269.1-P | Field mustard | nucleus | 40.35 | 48.17 |
| CDY51457 | Canola | nucleus | 40.35 | 48.17 |
| Solyc03g121400.1.1 | Tomato | nucleus | 43.86 | 47.62 |
| PGSC0003DMT400006421 | Potato | nucleus | 43.42 | 47.6 |
| KRH23341 | Soybean | nucleus | 43.86 | 47.17 |
| Bra023888.1-P | Field mustard | nucleus | 40.79 | 46.5 |
| CDY69021 | Canola | nucleus | 39.91 | 46.19 |
| CDY37299 | Canola | nucleus | 40.35 | 46.0 |
| Bra001822.1-P | Field mustard | nucleus | 41.23 | 45.85 |
| CDY32420 | Canola | nucleus | 41.23 | 45.63 |
| CDY48879 | Canola | nucleus | 41.23 | 45.63 |
| AT3G21270.1 | Thale cress | nucleus | 39.91 | 44.61 |
| AT1G51700.1 | Thale cress | nucleus | 37.28 | 43.81 |
| CDY43923 | Canola | nucleus | 29.82 | 42.24 |
| CDX87836 | Canola | nucleus | 33.33 | 41.76 |
| CDY52953 | Canola | nucleus | 35.53 | 41.75 |
| Bra030423.1-P | Field mustard | nucleus | 33.33 | 41.08 |
| CDY46544 | Canola | nucleus | 35.96 | 41.0 |
| Bra014297.1-P | Field mustard | nucleus | 35.53 | 40.5 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 18.42 | 35.29 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 20.18 | 30.87 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 29.39 | 28.88 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 18.86 | 28.48 |
| Bra011800.1-P | Field mustard | nucleus, plastid | 28.51 | 26.86 |
| CDX69349 | Canola | nucleus, plastid | 28.51 | 26.86 |
| CDX75689 | Canola | nucleus, plastid | 28.51 | 26.86 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 17.98 | 26.62 |
| AT4G38000.1 | Thale cress | nucleus, plastid | 27.63 | 25.61 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 25.0 | 23.85 |
| GSMUA_Achr11P... | Banana | nucleus | 23.25 | 21.9 |
| GSMUA_Achr6P10720_001 | Banana | nucleus | 23.25 | 19.41 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 25.0 | 18.87 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 26.32 | 18.29 |
| GSMUA_Achr2P22000_001 | Banana | nucleus | 25.88 | 15.61 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 26.32 | 15.42 |
| GSMUA_Achr3P01850_001 | Banana | nucleus | 23.25 | 15.32 |
| GSMUA_Achr10P... | Banana | nucleus | 23.68 | 15.13 |
| GSMUA_Achr11P... | Banana | nucleus | 25.88 | 14.01 |
| GSMUA_Achr11P... | Banana | nucleus | 25.0 | 12.23 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 21.93 | 10.75 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G27560_001 | EnsemblPlants:GSMUA_Achr10P27560_001 | EnsemblPlants:GSMUA_Achr10T27560_001 |
| InterPro:IPR003851 | UniProt:M0RLY0 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI000294949E | InterPro:Znf_Dof | SEG:seg | : |
Description
Dof zinc finger protein DOF1.7 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27560_001]
Coordinates
chr10:-:30676190..30676876
Molecular Weight (calculated)
24782.8 Da
IEP (calculated)
7.681
GRAVY (calculated)
-0.668
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDRTAAEAA APRIQAAKPQ FPEQDQNLRC PRCDSTNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGALRN IPVGGGTRKN SKRSNSFSSS AASSCKRPNP
101: PKPPSQLSEF PKTEPISLVY PPLDPDRHLL DMTGSFSSLL ASDGHLESLL GSFDPVGGDA AVLPNSSNAN RSCVGIQGLE LQSSTGDSGN EIMTTPVIQN
201: FERLEGDSGC WDAGWTDLAI YNPGSSMQ
101: PKPPSQLSEF PKTEPISLVY PPLDPDRHLL DMTGSFSSLL ASDGHLESLL GSFDPVGGDA AVLPNSSNAN RSCVGIQGLE LQSSTGDSGN EIMTTPVIQN
201: FERLEGDSGC WDAGWTDLAI YNPGSSMQ
001: MQDPAAYYQT MMAKQQQQQQ PQFAEQEQLK CPRCDSPNTK FCYYNNYNLS QPRHFCKSCR RYWTKGGALR NVPVGGGSRK NATKRSTSSS SSASSPSNSS
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
Arabidopsis Description
DOF3.1DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.