Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47156 | Soybean | nucleus | 62.5 | 63.98 |
| KRH09992 | Soybean | nucleus | 61.57 | 63.03 |
| KRH44186 | Soybean | nucleus | 62.04 | 62.91 |
| KRH23341 | Soybean | nucleus | 59.26 | 60.38 |
| Solyc06g062520.1.1 | Tomato | nucleus | 53.24 | 59.9 |
| Solyc03g121400.1.1 | Tomato | nucleus | 56.94 | 58.57 |
| PGSC0003DMT400006421 | Potato | nucleus | 55.09 | 57.21 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 47.22 | 52.04 |
| CDY56923 | Canola | nucleus | 42.59 | 49.46 |
| CDY51457 | Canola | nucleus | 43.06 | 48.69 |
| Bra031269.1-P | Field mustard | nucleus | 43.06 | 48.69 |
| AT3G21270.1 | Thale cress | nucleus | 45.37 | 48.04 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 47.37 |
| CDY32420 | Canola | nucleus | 43.98 | 46.12 |
| AT1G51700.1 | Thale cress | nucleus | 41.2 | 45.88 |
| Bra001822.1-P | Field mustard | nucleus | 43.52 | 45.85 |
| CDY48879 | Canola | nucleus | 43.52 | 45.63 |
| CDY69021 | Canola | nucleus | 41.2 | 45.18 |
| Bra023888.1-P | Field mustard | nucleus | 41.67 | 45.0 |
| CDY43923 | Canola | nucleus | 33.33 | 44.72 |
| CDY37299 | Canola | nucleus | 41.2 | 44.5 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 45.37 | 43.75 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 45.83 | 42.31 |
| CDX87836 | Canola | nucleus | 35.65 | 42.31 |
| Bra030423.1-P | Field mustard | nucleus | 36.11 | 42.16 |
| VIT_07s0255g00020.t01 | Wine grape | nucleus | 41.67 | 40.91 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 32.41 | 40.46 |
| VIT_18s0001g11310.t01 | Wine grape | nucleus | 39.35 | 37.61 |
| VIT_10s0003g01260.t01 | Wine grape | nucleus | 22.22 | 30.19 |
| VIT_01s0026g02580.t01 | Wine grape | nucleus | 32.41 | 14.68 |
| VIT_17s0000g06310.t01 | Wine grape | nucleus | 30.56 | 13.95 |
| VIT_14s0108g00980.t01 | Wine grape | nucleus | 32.41 | 13.7 |
| VIT_08s0056g01230.t01 | Wine grape | nucleus | 30.09 | 13.16 |
Protein Annotations
| EntrezGene:100263548 | wikigene:100263548 | MapMan:15.5.1.5 | ProteinID:CCB59358 | ProteinID:CCB59358.1 | UniProt:F6HY35 |
| EMBL:FN596494 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EntrezGene:LOC100263548 | wikigene:LOC100263548 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 |
| UniParc:UPI00015C8CB5 | ArrayExpress:VIT_09s0002g02490 | EnsemblPlantsGene:VIT_09s0002g02490 | EnsemblPlants:VIT_09s0002g02490.t01 | RefSeq:XP_003632855 | RefSeq:XP_003632855.1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:2271830..2273304
Molecular Weight (calculated)
23339.8 Da
IEP (calculated)
9.035
GRAVY (calculated)
-0.779
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDPSTFQPM KTHFPEQEHL KCPRCESTNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL RNIPVGGGSR KNTKRSSNPK RPSSSSSTSS VSSPPVSSTS
101: NAAAQKSEPS GIYVTAADQD RRMLDISGSF SSLLASNGQF GSLLESLNPT GSVRGVPLSA FSETPNSDSG RTPAMELQSN GNSESFLGIQ TGDSNCWNGG
201: NGWPDLAIYT PGSTFQ
101: NAAAQKSEPS GIYVTAADQD RRMLDISGSF SSLLASNGQF GSLLESLNPT GSVRGVPLSA FSETPNSDSG RTPAMELQSN GNSESFLGIQ TGDSNCWNGG
201: NGWPDLAIYT PGSTFQ
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.