Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006421 | Potato | nucleus | 94.29 | 95.19 |
| Solyc06g062520.1.1 | Tomato | nucleus | 59.05 | 64.58 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 58.57 | 56.94 |
| KRH47156 | Soybean | nucleus | 56.67 | 56.4 |
| KRH44186 | Soybean | nucleus | 55.71 | 54.93 |
| KRH09992 | Soybean | nucleus | 54.76 | 54.5 |
| KRH23341 | Soybean | nucleus | 52.86 | 52.36 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 46.67 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 47.62 | 43.86 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 45.71 | 42.86 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 44.76 | 40.17 |
| Solyc02g065290.1.1 | Tomato | nucleus | 36.19 | 37.44 |
| Solyc02g090220.2.1 | Tomato | nucleus | 40.0 | 32.56 |
| Solyc04g079570.1.1 | Tomato | nucleus | 36.19 | 31.8 |
| Solyc02g076850.1.1 | Tomato | nucleus | 22.38 | 28.83 |
| Solyc02g067230.2.1 | Tomato | nucleus | 30.95 | 13.92 |
| Solyc02g088070.2.1 | Tomato | nucleus | 30.0 | 13.64 |
| Solyc05g007880.2.1 | Tomato | nucleus | 28.1 | 13.38 |
| Solyc06g069760.2.1 | Tomato | nucleus | 30.95 | 13.21 |
| Solyc03g115940.2.1 | Tomato | nucleus | 30.48 | 12.77 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4BMT9 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | EnsemblPlantsGene:Solyc03g121400.1 |
| EnsemblPlants:Solyc03g121400.1.1 | UniParc:UPI0002767300 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:-:69506059..69506691
Molecular Weight (calculated)
22591.8 Da
IEP (calculated)
9.239
GRAVY (calculated)
-0.853
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDPSIYSQI KPQFPEQEHL KCPRCDSPNT KFCYYNNYNL SQPRHYCKSC RRYWTKGGTL RNIPVGGGSR KSTKRSSSSS SSSKKSSSTS TTSPATPPLT
101: SSSSSTNPKP EPFGIPAIPS FDVMTTSTGP FSSLLASTEP QFGNFLEALN PNNNNGSTLQ LGNPVSSSGH QNGNTSYLGV QNGGESNNCW NGGNNGWPDL
201: AIFTPGSNFQ
101: SSSSSTNPKP EPFGIPAIPS FDVMTTSTGP FSSLLASTEP QFGNFLEALN PNNNNGSTLQ LGNPVSSSGH QNGNTSYLGV QNGGESNNCW NGGNNGWPDL
201: AIFTPGSNFQ
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.