Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012119.1-P | Field mustard | nucleus | 99.55 | 99.55 |
| CDY12790 | Canola | nucleus | 94.09 | 94.52 |
| CDY18628 | Canola | nucleus | 78.18 | 81.13 |
| CDX81350 | Canola | nucleus | 80.0 | 78.57 |
| AT5G66940.1 | Thale cress | nucleus | 80.0 | 78.22 |
| CDY02086 | Canola | nucleus | 60.45 | 54.96 |
| CDY17783 | Canola | nucleus | 56.82 | 54.59 |
| CDX83127 | Canola | nucleus | 57.73 | 54.04 |
| CDY54696 | Canola | nucleus | 58.18 | 53.78 |
| CDY52832 | Canola | nucleus | 52.73 | 52.25 |
| CDY23010 | Canola | nucleus | 57.27 | 51.01 |
| PGSC0003DMT400026137 | Potato | nucleus | 45.91 | 42.08 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 30.0 | 38.15 |
| Solyc02g090220.2.1 | Tomato | nucleus | 44.55 | 37.98 |
| CDY20892 | Canola | nucleus | 32.27 | 34.47 |
| CDY58082 | Canola | nucleus | 31.82 | 33.98 |
| CDY43923 | Canola | nucleus | 24.09 | 32.92 |
| CDY56923 | Canola | nucleus | 27.73 | 32.8 |
| CDX87836 | Canola | nucleus | 26.82 | 32.42 |
| CDY71347 | Canola | nucleus | 19.09 | 31.82 |
| CDY52953 | Canola | nucleus | 27.73 | 31.44 |
| CDY51457 | Canola | nucleus | 27.27 | 31.41 |
| CDY17009 | Canola | nucleus | 32.73 | 31.3 |
| CDY46544 | Canola | nucleus | 28.18 | 31.0 |
| CDY48879 | Canola | nucleus | 28.18 | 30.1 |
| CDY32420 | Canola | nucleus | 27.73 | 29.61 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 30.91 | 29.57 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 30.91 | 29.57 |
| CDY69021 | Canola | nucleus | 26.36 | 29.44 |
| Zm00001d039482_P001 | Maize | nucleus | 30.45 | 29.0 |
| CDY37299 | Canola | nucleus | 26.36 | 29.0 |
| KXG31638 | Sorghum | nucleus | 29.55 | 27.66 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 29.55 | 27.31 |
| CDX99791 | Canola | nucleus | 20.45 | 26.01 |
| CDY50789 | Canola | nucleus | 20.45 | 25.71 |
| CDY15647 | Canola | nucleus | 20.0 | 24.86 |
| CDY43321 | Canola | nucleus | 19.09 | 24.14 |
| CDX90171 | Canola | nucleus | 19.09 | 24.14 |
| CDY37670 | Canola | nucleus | 18.18 | 23.81 |
| CDY67393 | Canola | nucleus | 18.18 | 23.53 |
| CDX69349 | Canola | nucleus, plastid | 25.45 | 23.14 |
| CDX75689 | Canola | nucleus, plastid | 25.0 | 22.73 |
| CDY00286 | Canola | nucleus | 22.27 | 17.95 |
| CDY69084 | Canola | nucleus | 22.27 | 17.88 |
| CDY69244 | Canola | nucleus | 23.64 | 17.81 |
| CDY67518 | Canola | nucleus | 23.64 | 17.81 |
| CDY44994 | Canola | nucleus | 21.36 | 17.41 |
| CDY46443 | Canola | nucleus | 24.09 | 15.82 |
| CDY07344 | Canola | nucleus | 26.36 | 15.03 |
| CDY16193 | Canola | nucleus | 22.27 | 14.98 |
| CDX95919 | Canola | nucleus | 25.0 | 14.95 |
| CDY67869 | Canola | nucleus | 25.91 | 14.81 |
| CDY50734 | Canola | nucleus | 18.18 | 14.76 |
| CDY01768 | Canola | nucleus | 24.55 | 14.67 |
| CDY72477 | Canola | nucleus | 24.55 | 14.67 |
| CDY50735 | Canola | extracellular | 23.18 | 14.01 |
| CDY66672 | Canola | nucleus | 26.36 | 13.58 |
| CDY47405 | Canola | nucleus | 26.36 | 13.52 |
| CDX74440 | Canola | nucleus | 23.18 | 12.03 |
| CDY37010 | Canola | nucleus | 20.91 | 11.79 |
| CDY30261 | Canola | nucleus | 23.18 | 11.59 |
| CDX67434 | Canola | nucleus | 22.27 | 11.58 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078EH84 | EnsemblPlants:CDY01450 | ProteinID:CDY01450 | ProteinID:CDY01450.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00112456001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EEF18C |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA07g12230D
Coordinates
chrLK031926:+:1123471..1124133
Molecular Weight (calculated)
23306.0 Da
IEP (calculated)
9.009
GRAVY (calculated)
-0.413
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDVNESRR LTKIPHGGAA ADQQDQLPCP RCESTNTKFC YYNNYNFSQP RHFCKACRRY WTHGGTLRDI PVGGVSRKSS KRSRTCSSVA VSAAVGSREF
101: PLQATPVLFP PPSSNNGDVT AAKGSASSVY GGFTSLLSYN AAASRNGPGG GFNGLEGFGL GLGHGSYFDN VRFGQGITVW PFSSSATDAT SAVTSHVGPI
201: PATWQFEGPE SKVGFVSGDY
101: PLQATPVLFP PPSSNNGDVT AAKGSASSVY GGFTSLLSYN AAASRNGPGG GFNGLEGFGL GLGHGSYFDN VRFGQGITVW PFSSSATDAT SAVTSHVGPI
201: PATWQFEGPE SKVGFVSGDY
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.