Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018141.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY47405 | Canola | nucleus | 96.96 | 96.5 |
| AT3G47500.1 | Thale cress | nucleus | 82.9 | 79.02 |
| CDY69244 | Canola | nucleus | 45.67 | 66.78 |
| CDY67518 | Canola | nucleus | 45.2 | 66.1 |
| CDY00286 | Canola | nucleus | 41.92 | 65.57 |
| CDY69084 | Canola | nucleus | 41.92 | 65.33 |
| KRH54567 | Soybean | nucleus | 50.82 | 47.38 |
| KRH56903 | Soybean | nucleus | 52.22 | 47.15 |
| KRH03487 | Soybean | nucleus | 51.99 | 47.13 |
| VIT_17s0000g06310.t01 | Wine grape | nucleus | 51.99 | 46.93 |
| KRH63324 | Soybean | nucleus | 50.35 | 45.74 |
| CDY71347 | Canola | nucleus | 13.58 | 43.94 |
| VIT_01s0026g02580.t01 | Wine grape | nucleus | 48.24 | 43.19 |
| Solyc03g115940.2.1 | Tomato | nucleus | 47.78 | 40.72 |
| CDX99791 | Canola | nucleus | 16.16 | 39.88 |
| CDY43321 | Canola | nucleus | 16.16 | 39.66 |
| CDX90171 | Canola | nucleus | 16.16 | 39.66 |
| CDY50789 | Canola | nucleus | 16.16 | 39.43 |
| PGSC0003DMT400050273 | Potato | nucleus | 45.9 | 38.97 |
| CDY15647 | Canola | nucleus | 15.69 | 37.85 |
| CDY67393 | Canola | nucleus | 14.99 | 37.65 |
| CDY37670 | Canola | nucleus | 14.75 | 37.5 |
| PGSC0003DMT400083080 | Potato | nucleus | 40.98 | 35.57 |
| Solyc06g069760.2.1 | Tomato | nucleus | 40.28 | 34.96 |
| EER95426 | Sorghum | nucleus | 34.66 | 34.91 |
| CDY01768 | Canola | nucleus | 29.98 | 34.78 |
| CDX95919 | Canola | nucleus | 29.98 | 34.78 |
| OQU90492 | Sorghum | nucleus | 39.34 | 34.71 |
| CDY16193 | Canola | nucleus | 26.46 | 34.56 |
| Os07t0685000-02 | Rice | nucleus | 38.41 | 34.45 |
| TraesCS2A01G100800.1 | Wheat | nucleus | 38.41 | 34.24 |
| HORVU2Hr1G017290.1 | Barley | nucleus | 37.94 | 34.11 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 38.17 | 34.03 |
| CDY72477 | Canola | nucleus | 29.27 | 33.97 |
| CDX74440 | Canola | nucleus | 33.72 | 33.96 |
| CDY07344 | Canola | nucleus | 30.45 | 33.68 |
| Zm00001d027846_P001 | Maize | nucleus | 33.96 | 33.56 |
| CDY67869 | Canola | nucleus | 30.21 | 33.51 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 33.96 | 33.49 |
| Os03t0169600-01 | Rice | nucleus | 34.19 | 33.18 |
| TraesCS4A01G017700.1 | Wheat | nucleus | 33.96 | 33.18 |
| HORVU4Hr1G074990.1 | Barley | nucleus | 34.19 | 33.03 |
| CDX67434 | Canola | nucleus | 32.55 | 32.86 |
| TraesCS4D01G285100.1 | Wheat | nucleus | 33.96 | 32.81 |
| TraesCS2D01G100300.1 | Wheat | mitochondrion, nucleus | 38.41 | 32.73 |
| CDY37010 | Canola | nucleus | 29.74 | 32.56 |
| CDY30261 | Canola | nucleus | 33.49 | 32.5 |
| Zm00001d022525_P001 | Maize | nucleus | 38.64 | 32.04 |
| CDY50735 | Canola | extracellular | 27.17 | 31.87 |
| CDY44994 | Canola | nucleus | 20.14 | 31.85 |
| CDY46443 | Canola | nucleus | 24.36 | 31.04 |
| CDY50734 | Canola | nucleus | 19.2 | 30.26 |
| CDY43923 | Canola | nucleus | 11.24 | 29.81 |
| CDX69349 | Canola | nucleus, plastid | 16.86 | 29.75 |
| CDY52832 | Canola | nucleus | 15.46 | 29.73 |
| CDY56923 | Canola | nucleus | 12.88 | 29.57 |
| CDX75689 | Canola | nucleus, plastid | 16.39 | 28.93 |
| CDY51457 | Canola | nucleus | 12.41 | 27.75 |
| CDX83127 | Canola | nucleus | 15.22 | 27.66 |
| CDY17783 | Canola | nucleus | 14.75 | 27.51 |
| CDY54696 | Canola | nucleus | 15.22 | 27.31 |
| CDY02086 | Canola | nucleus | 15.46 | 27.27 |
| CDY23010 | Canola | nucleus | 15.46 | 26.72 |
| CDY18628 | Canola | nucleus | 13.11 | 26.42 |
| CDY01450 | Canola | nucleus | 13.58 | 26.36 |
| CDY52953 | Canola | nucleus | 11.94 | 26.29 |
| CDY46544 | Canola | nucleus | 12.18 | 26.0 |
| CDY69021 | Canola | nucleus | 11.94 | 25.89 |
| CDX87836 | Canola | nucleus | 11.01 | 25.82 |
| CDY32420 | Canola | nucleus | 12.41 | 25.73 |
| CDY20892 | Canola | nucleus | 12.41 | 25.73 |
| CDY48879 | Canola | nucleus | 12.41 | 25.73 |
| CDY58082 | Canola | nucleus | 12.41 | 25.73 |
| CDY12790 | Canola | nucleus | 13.11 | 25.57 |
| CDY37299 | Canola | nucleus | 11.94 | 25.5 |
| CDX81350 | Canola | nucleus | 13.35 | 25.45 |
| CDY17009 | Canola | nucleus | 12.41 | 23.04 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JMT1 | UniProt:A0A078JMT1 | EnsemblPlants:CDY66672 | ProteinID:CDY66672 | ProteinID:CDY66672.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00055545001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF7 | UniParc:UPI000253F459 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng22720DBnaAnng22720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMT1]
Coordinates
chrLK035400:+:9549..11607
Molecular Weight (calculated)
46958.8 Da
IEP (calculated)
8.779
GRAVY (calculated)
-0.898
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMESRDPAI KLFGMKIPFP AVFEPTTAVA LEEDYSGGDD TSPEKVTTEQ ATPEKKNNCN NKSLNNSNDS KPETGDKEEA TSTDQIESDE TNQQTTADGK
101: TLKKPTKILP CPRCKSMDTK FCYYNNYNIN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK HKSSSSQYRH ITISEALQAA RLDPGLQANT RVLSFGLQAP
201: HQQHAAPMTP VMKLQGDQKV SNGARNARVE NGDDCSSGSS VTTSVDETRA QSCRVVEPQV NNNNMNGYAC IPGVPWPYTW NPAMPPPGFY PPPGYPMPFY
301: PYWTIPMAPP NQSSSPMSQK GSSPNSPTLG KHYRDEDSST ERKQRNGCVI VPKTLRIDDP NEAAKSSIWT TLGIKNEGST LGSKGGGMFK GFDQKTNKSN
401: KDQTNNSHVL SANPAALSRS LNFQERV
101: TLKKPTKILP CPRCKSMDTK FCYYNNYNIN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK HKSSSSQYRH ITISEALQAA RLDPGLQANT RVLSFGLQAP
201: HQQHAAPMTP VMKLQGDQKV SNGARNARVE NGDDCSSGSS VTTSVDETRA QSCRVVEPQV NNNNMNGYAC IPGVPWPYTW NPAMPPPGFY PPPGYPMPFY
301: PYWTIPMAPP NQSSSPMSQK GSSPNSPTLG KHYRDEDSST ERKQRNGCVI VPKTLRIDDP NEAAKSSIWT TLGIKNEGST LGSKGGGMFK GFDQKTNKSN
401: KDQTNNSHVL SANPAALSRS LNFQERV
001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
Arabidopsis Description
CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.