Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028437.1-P | Field mustard | nucleus | 91.73 | 97.0 |
| CDY37010 | Canola | nucleus | 81.56 | 88.46 |
| CDX74440 | Canola | nucleus | 76.83 | 76.65 |
| CDY30261 | Canola | nucleus | 77.54 | 74.55 |
| AT5G39660.1 | Thale cress | nucleus | 78.25 | 72.43 |
| CDY71347 | Canola | nucleus | 14.18 | 45.45 |
| CDY00286 | Canola | nucleus | 28.84 | 44.69 |
| CDY67518 | Canola | nucleus | 30.5 | 44.18 |
| CDY69084 | Canola | nucleus | 28.37 | 43.8 |
| CDY69244 | Canola | nucleus | 30.02 | 43.49 |
| CDX99791 | Canola | nucleus | 16.31 | 39.88 |
| CDX90171 | Canola | nucleus | 16.31 | 39.66 |
| CDY50789 | Canola | nucleus | 16.31 | 39.43 |
| CDY43321 | Canola | nucleus | 16.08 | 39.08 |
| CDY15647 | Canola | nucleus | 15.84 | 37.85 |
| CDY37670 | Canola | nucleus | 14.89 | 37.5 |
| CDY67393 | Canola | nucleus | 14.66 | 36.47 |
| KRH01188 | Soybean | nucleus | 43.03 | 36.33 |
| KRH40083 | Soybean | nucleus | 42.79 | 35.98 |
| Solyc05g007880.2.1 | Tomato | nucleus | 36.64 | 35.15 |
| PGSC0003DMT400047370 | Potato | nucleus | 36.64 | 35.07 |
| CDY47405 | Canola | nucleus | 33.57 | 33.1 |
| CDX95919 | Canola | nucleus | 28.37 | 32.61 |
| CDY66672 | Canola | nucleus | 32.86 | 32.55 |
| CDY16193 | Canola | nucleus | 25.06 | 32.42 |
| CDY72477 | Canola | nucleus | 27.9 | 32.07 |
| CDY01768 | Canola | nucleus | 27.66 | 31.79 |
| GSMUA_Achr11P... | Banana | nucleus | 34.75 | 31.55 |
| CDY07344 | Canola | nucleus | 27.42 | 30.05 |
| CDY50735 | Canola | extracellular | 25.77 | 29.95 |
| CDY67869 | Canola | nucleus | 27.19 | 29.87 |
| CDY56923 | Canola | nucleus | 13.0 | 29.57 |
| CDY43923 | Canola | nucleus | 10.87 | 28.57 |
| CDY50734 | Canola | nucleus | 18.2 | 28.41 |
| CDY51457 | Canola | nucleus | 12.77 | 28.27 |
| CDY44994 | Canola | nucleus | 17.49 | 27.41 |
| CDY37299 | Canola | nucleus | 12.77 | 27.0 |
| CDY52953 | Canola | nucleus | 12.29 | 26.8 |
| CDY48879 | Canola | nucleus | 13.0 | 26.7 |
| CDY32420 | Canola | nucleus | 13.0 | 26.7 |
| CDY46544 | Canola | nucleus | 12.53 | 26.5 |
| CDY69021 | Canola | nucleus | 12.29 | 26.4 |
| CDY46443 | Canola | nucleus | 20.8 | 26.27 |
| CDY52832 | Canola | nucleus | 13.71 | 26.13 |
| CDX69349 | Canola | nucleus, plastid | 14.66 | 25.62 |
| CDX75689 | Canola | nucleus, plastid | 14.66 | 25.62 |
| CDY17783 | Canola | nucleus | 13.71 | 25.33 |
| CDX87836 | Canola | nucleus | 10.87 | 25.27 |
| CDY58082 | Canola | nucleus | 12.29 | 25.24 |
| CDY20892 | Canola | nucleus | 12.29 | 25.24 |
| CDY23010 | Canola | nucleus | 14.42 | 24.7 |
| CDY02086 | Canola | nucleus | 13.95 | 24.38 |
| CDX83127 | Canola | nucleus | 13.48 | 24.26 |
| CDY18628 | Canola | nucleus | 12.06 | 24.06 |
| CDY54696 | Canola | nucleus | 13.48 | 23.95 |
| CDX81350 | Canola | nucleus | 12.29 | 23.21 |
| CDY17009 | Canola | nucleus | 12.29 | 22.61 |
| CDY12790 | Canola | nucleus | 11.58 | 22.37 |
| CDY01450 | Canola | nucleus | 11.58 | 22.27 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078BUR5 | EnsemblPlants:CDX67434 | ProteinID:CDX67434 | ProteinID:CDX67434.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00098534001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | UniParc:UPI0004EF4142 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g14740D
Coordinates
chrLK031787:+:225609..227174
Molecular Weight (calculated)
46293.0 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.738
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDPAMKLFG KTIPLPELVC VDSSSSYTEH QHQNPVRLSD SCTGDDEEMG DSGLAGDDVW FHGGDSESEK EEKANQCGEE SSNVTMASST KTDEESSSQN
101: NETCSREGKL KKPDKILPCP RCSSMETKFC YYNNYNVNQP RHFCKKCQRY WTAGGTMRNV PVGAGRRKNK SLASHYNRYV GITSAEDMHK AAARTDPNLM
201: TIGSDSVLCE SMASGLSLAE KSMLNTETGL QEEPNEGLKI TVPLKNKETV AISPLPKAPC FAGPPPPPAA WSYPWNGVSW TVLPFYPPPA YWSCPGVSPG
301: TWNSFTWMSQ PISPSGGSGP NSPTLGKHSR DESIAEPGTK RISGRCLWVP KTLRIDDPEE AAKSSIWETL GIKKDEKTDT FRAFRSSHKV KSCLSDGKHP
401: GRRPELLANP AALSRSANFH ESS
101: NETCSREGKL KKPDKILPCP RCSSMETKFC YYNNYNVNQP RHFCKKCQRY WTAGGTMRNV PVGAGRRKNK SLASHYNRYV GITSAEDMHK AAARTDPNLM
201: TIGSDSVLCE SMASGLSLAE KSMLNTETGL QEEPNEGLKI TVPLKNKETV AISPLPKAPC FAGPPPPPAA WSYPWNGVSW TVLPFYPPPA YWSCPGVSPG
301: TWNSFTWMSQ PISPSGGSGP NSPTLGKHSR DESIAEPGTK RISGRCLWVP KTLRIDDPEE AAKSSIWETL GIKKDEKTDT FRAFRSSHKV KSCLSDGKHP
401: GRRPELLANP AALSRSANFH ESS
001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
Arabidopsis Description
CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.