Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030010.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY54696 | Canola | nucleus | 99.15 | 97.9 |
| CDY17783 | Canola | nucleus | 77.87 | 79.91 |
| CDY02086 | Canola | nucleus | 80.0 | 77.69 |
| CDY52832 | Canola | nucleus | 73.19 | 77.48 |
| CDY23010 | Canola | nucleus | 78.72 | 74.9 |
| AT3G50410.1 | Thale cress | nucleus | 78.72 | 73.12 |
| CDY18628 | Canola | nucleus | 52.34 | 58.02 |
| CDY12790 | Canola | nucleus | 54.04 | 57.99 |
| CDY01450 | Canola | nucleus | 54.04 | 57.73 |
| CDX81350 | Canola | nucleus | 51.91 | 54.46 |
| KRH70017 | Soybean | nucleus | 50.21 | 50.43 |
| KRH08373 | Soybean | nucleus | 48.09 | 47.88 |
| CDY20892 | Canola | nucleus | 34.47 | 39.32 |
| CDY58082 | Canola | nucleus | 34.04 | 38.84 |
| CDY56923 | Canola | nucleus | 29.36 | 37.1 |
| CDY51457 | Canola | nucleus | 28.94 | 35.6 |
| CDY43923 | Canola | nucleus | 23.4 | 34.16 |
| CDY69021 | Canola | nucleus | 28.51 | 34.01 |
| CDY17009 | Canola | nucleus | 33.19 | 33.91 |
| CDX87836 | Canola | nucleus | 25.96 | 33.52 |
| CDY52953 | Canola | nucleus | 27.66 | 33.51 |
| CDY71347 | Canola | nucleus | 18.72 | 33.33 |
| CDY32420 | Canola | nucleus | 28.94 | 33.01 |
| CDY48879 | Canola | nucleus | 28.94 | 33.01 |
| CDY37299 | Canola | nucleus | 28.09 | 33.0 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 31.91 | 32.61 |
| CDY46544 | Canola | nucleus | 27.66 | 32.5 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 31.49 | 32.17 |
| Zm00001d039482_P001 | Maize | nucleus | 30.64 | 31.17 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 31.49 | 31.09 |
| KXG31638 | Sorghum | nucleus | 30.64 | 30.64 |
| CDX99791 | Canola | nucleus | 20.43 | 27.75 |
| CDX90171 | Canola | nucleus | 20.43 | 27.59 |
| CDY43321 | Canola | nucleus | 20.43 | 27.59 |
| CDY50789 | Canola | nucleus | 20.43 | 27.43 |
| CDY15647 | Canola | nucleus | 20.0 | 26.55 |
| CDY37670 | Canola | nucleus | 18.72 | 26.19 |
| CDY67393 | Canola | nucleus | 18.72 | 25.88 |
| CDX69349 | Canola | nucleus, plastid | 25.53 | 24.79 |
| CDX75689 | Canola | nucleus, plastid | 24.68 | 23.97 |
| CDY69244 | Canola | nucleus | 25.11 | 20.21 |
| CDY00286 | Canola | nucleus | 23.4 | 20.15 |
| CDY69084 | Canola | nucleus | 23.4 | 20.07 |
| CDY67518 | Canola | nucleus | 24.26 | 19.52 |
| CDY44994 | Canola | nucleus | 22.13 | 19.26 |
| CDY16193 | Canola | nucleus | 25.53 | 18.35 |
| CDY46443 | Canola | nucleus | 24.26 | 17.01 |
| CDY50734 | Canola | nucleus | 18.72 | 16.24 |
| CDY50735 | Canola | extracellular | 25.11 | 16.21 |
| CDY07344 | Canola | nucleus | 25.96 | 15.8 |
| CDX95919 | Canola | nucleus | 24.68 | 15.76 |
| CDY67869 | Canola | nucleus | 25.53 | 15.58 |
| CDY01768 | Canola | nucleus | 24.26 | 15.49 |
| CDY66672 | Canola | nucleus | 27.66 | 15.22 |
| CDY47405 | Canola | nucleus | 27.66 | 15.15 |
| CDY72477 | Canola | nucleus | 23.4 | 14.95 |
| CDX74440 | Canola | nucleus | 24.68 | 13.68 |
| CDX67434 | Canola | nucleus | 24.26 | 13.48 |
| CDY37010 | Canola | nucleus | 22.13 | 13.33 |
| CDY30261 | Canola | nucleus | 24.68 | 13.18 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078D215 | EnsemblPlants:CDX83127 | ProteinID:CDX83127 | ProteinID:CDX83127.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00138646001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0002544521 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA01g21270D
Coordinates
chrLK031831:+:1875363..1877339
Molecular Weight (calculated)
24600.5 Da
IEP (calculated)
9.050
GRAVY (calculated)
-0.339
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTTSNTDAM RLHGVITANP PPATEQLPCP RCNSTNTKFC YYNNYNFSQP RHFCKSCRRY WTHGGTLRDI PVGGGTRKAA KRSRTCSSSA GSRSVPLQAT
101: PVLFPQSSIS NGVSHTVTAP LDGKGSALSL SGSFTSLLNQ NATATHGSGS VLGIGLGSGY DDVSFGLGRA VWPFSTVGDA GTTNVGSNGG HQGVVTIPAT
201: WQFEGLETNN AGGFVSGEYF AWPDLSITTS GNSHK
101: PVLFPQSSIS NGVSHTVTAP LDGKGSALSL SGSFTSLLNQ NATATHGSGS VLGIGLGSGY DDVSFGLGRA VWPFSTVGDA GTTNVGSNGG HQGVVTIPAT
201: WQFEGLETNN AGGFVSGEYF AWPDLSITTS GNSHK
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.