Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70017 | Soybean | nucleus | 86.02 | 86.75 |
| VIT_07s0255g00020.t01 | Wine grape | nucleus | 62.71 | 67.27 |
| PGSC0003DMT400026137 | Potato | nucleus | 58.05 | 57.08 |
| CDY02086 | Canola | nucleus | 52.54 | 51.24 |
| Bra036082.1-P | Field mustard | nucleus | 47.88 | 50.9 |
| CDY52832 | Canola | nucleus | 47.88 | 50.9 |
| Bra012901.1-P | Field mustard | nucleus | 52.12 | 50.83 |
| Solyc02g090220.2.1 | Tomato | nucleus | 55.51 | 50.78 |
| CDY23010 | Canola | nucleus | 52.12 | 49.8 |
| CDY17783 | Canola | nucleus | 48.31 | 49.78 |
| AT3G50410.1 | Thale cress | nucleus | 52.97 | 49.41 |
| CDX83127 | Canola | nucleus | 47.88 | 48.09 |
| Bra030010.1-P | Field mustard | nucleus | 47.88 | 48.09 |
| CDY54696 | Canola | nucleus | 48.31 | 47.9 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 34.75 | 47.4 |
| KRH44186 | Soybean | nucleus | 35.59 | 39.44 |
| KRH47156 | Soybean | nucleus | 35.17 | 39.34 |
| KRH09992 | Soybean | nucleus | 33.9 | 37.91 |
| KRH23341 | Soybean | nucleus | 33.9 | 37.74 |
| KRH42862 | Soybean | nucleus | 10.59 | 32.05 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 29.24 | 30.0 |
| KRH21283 | Soybean | nucleus | 18.64 | 29.93 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 28.39 | 29.13 |
| KXG31638 | Sorghum | nucleus | 28.81 | 28.94 |
| KRH11011 | Soybean | nucleus | 18.64 | 28.76 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 28.81 | 28.57 |
| Zm00001d039482_P001 | Maize | nucleus | 27.54 | 28.14 |
| KRH58964 | Soybean | nucleus | 18.22 | 26.06 |
| KRG93541 | Soybean | nucleus | 23.31 | 14.29 |
| KRH03487 | Soybean | nucleus | 28.39 | 14.23 |
| KRH56903 | Soybean | nucleus | 28.39 | 14.16 |
| KRH01188 | Soybean | nucleus | 28.81 | 13.57 |
| KRH74885 | Soybean | nucleus | 27.54 | 13.57 |
| KRH40083 | Soybean | nucleus | 28.39 | 13.32 |
| KRH18471 | Soybean | nucleus | 27.54 | 13.32 |
| KRH70746 | Soybean | nucleus, plastid | 27.12 | 13.2 |
| KRH50577 | Soybean | nucleus | 26.69 | 13.15 |
| KRH54567 | Soybean | nucleus | 25.42 | 13.1 |
| KRG89621 | Soybean | nucleus | 26.69 | 13.07 |
| KRH63324 | Soybean | nucleus | 25.85 | 12.98 |
| KRH44749 | Soybean | nucleus | 23.31 | 12.67 |
| KRH13096 | Soybean | nucleus, vacuole | 24.58 | 12.45 |
| KRH64974 | Soybean | nucleus | 22.03 | 11.28 |
| KRG94921 | Soybean | nucleus | 22.88 | 11.18 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:778099 | EMBL:ACUP02010168 | EnsemblPlantsGene:GLYMA_16G145000 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1MNL4 | InterPro:IPR003851 | EnsemblPlants:KRH08373 | ProteinID:KRH08373 | ProteinID:KRH08373.1 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0000E648F2 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:30561565..30562942
Molecular Weight (calculated)
24625.3 Da
IEP (calculated)
8.688
GRAVY (calculated)
-0.525
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSNSGESR RASKPHRSVA APPVEPENLP CPRCDSANTK FCYYNNYNYS QPRHFCKSCR RYWTHGGTLR DIPVGGGSRK NAKRSRTHHA AAATSSSSST
101: SSATTSAHEH HNAHTLTALA PVTAATHFGH DGDVKQTNGN ACGSYTSLLN NTQGSGFFAL GGFGLGLGHG FDDMGFGIGR SGWAFPGMVD NGNIGGAIAS
201: SGVNTWQLES GEGGFVGGDC FSWPGLAIST PGNGLK
101: SSATTSAHEH HNAHTLTALA PVTAATHFGH DGDVKQTNGN ACGSYTSLLN NTQGSGFFAL GGFGLGLGHG FDDMGFGIGR SGWAFPGMVD NGNIGGAIAS
201: SGVNTWQLES GEGGFVGGDC FSWPGLAIST PGNGLK
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.