Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70746 | Soybean | nucleus, plastid | 87.68 | 86.6 |
| KRH50577 | Soybean | nucleus | 57.62 | 57.62 |
| KRG89621 | Soybean | nucleus | 56.16 | 55.81 |
| KRH42862 | Soybean | nucleus | 8.77 | 53.85 |
| KRH01188 | Soybean | nucleus | 51.15 | 48.9 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 30.69 | 48.68 |
| KRH56903 | Soybean | nucleus | 48.02 | 48.63 |
| KRH03487 | Soybean | nucleus | 47.6 | 48.41 |
| KRH40083 | Soybean | nucleus | 50.1 | 47.71 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 31.94 | 46.65 |
| KRH54567 | Soybean | nucleus | 43.63 | 45.63 |
| KRH63324 | Soybean | nucleus | 44.05 | 44.89 |
| KRH58964 | Soybean | nucleus | 15.45 | 44.85 |
| KRH21283 | Soybean | nucleus | 13.57 | 44.22 |
| KRH11011 | Soybean | nucleus | 13.99 | 43.79 |
| KRH18471 | Soybean | nucleus | 41.75 | 40.98 |
| CDY01768 | Canola | nucleus | 30.9 | 40.22 |
| CDX95919 | Canola | nucleus | 30.69 | 39.95 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 31.94 | 39.33 |
| CDY16193 | Canola | nucleus | 26.72 | 39.14 |
| Bra024683.1-P | Field mustard | nucleus | 26.72 | 39.14 |
| CDY72477 | Canola | nucleus | 30.06 | 39.13 |
| Bra004396.1-P | Field mustard | nucleus | 30.06 | 39.13 |
| KRG93541 | Soybean | nucleus | 31.32 | 38.96 |
| AT1G69570.1 | Thale cress | nucleus | 31.52 | 37.84 |
| Bra003994.1-P | Field mustard | nucleus | 30.48 | 37.82 |
| CDY07344 | Canola | nucleus | 30.48 | 37.82 |
| CDY67869 | Canola | nucleus | 30.27 | 37.66 |
| GSMUA_Achr11P... | Banana | nucleus | 31.32 | 35.63 |
| CDY44994 | Canola | nucleus | 20.04 | 35.56 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 27.56 | 35.48 |
| CDY50735 | Canola | extracellular | 26.51 | 34.89 |
| Bra016286.1-P | Field mustard | nucleus | 23.59 | 33.73 |
| CDY46443 | Canola | nucleus | 23.38 | 33.43 |
| KRG94921 | Soybean | nucleus | 32.99 | 32.71 |
| EES02731 | Sorghum | nucleus | 37.79 | 32.32 |
| KRH64974 | Soybean | nucleus | 31.11 | 32.32 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 36.12 | 32.1 |
| KRH44749 | Soybean | nucleus | 29.02 | 32.03 |
| CDY50734 | Canola | nucleus | 17.95 | 31.73 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 35.7 | 31.73 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 35.49 | 31.6 |
| KRH13096 | Soybean | nucleus, vacuole | 29.85 | 30.69 |
| Zm00001d040362_P001 | Maize | nucleus | 36.12 | 30.24 |
| KRH70017 | Soybean | nucleus | 14.4 | 29.49 |
| KRH44186 | Soybean | nucleus | 12.94 | 29.11 |
| KRH47156 | Soybean | nucleus | 12.73 | 28.91 |
| KRH09992 | Soybean | nucleus | 12.73 | 28.91 |
| Os01t0264000-01 | Rice | nucleus | 29.44 | 28.43 |
| KRH23341 | Soybean | nucleus | 12.32 | 27.83 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 26.93 | 27.74 |
| KRH08373 | Soybean | nucleus | 13.57 | 27.54 |
Protein Annotations
| EntrezGene:100775201 | MapMan:15.5.1.5 | EMBL:ACUP02000084 | EnsemblPlantsGene:GLYMA_01G049400 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:K7K1V7 | EnsemblPlants:KRH74885 | ProteinID:KRH74885 | ProteinID:KRH74885.1 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF7 | UniParc:UPI00023BB036 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:5763611..5767687
Molecular Weight (calculated)
52555.9 Da
IEP (calculated)
8.347
GRAVY (calculated)
-0.834
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVVIKDSA IKLFGRTISL PRNTKNEVSP DEPAPPEDSS SSFPREVSST TEYDAGDKKP SRKELTSTQE DVEASHQTLE ETKSPTSSSC NLENPKTPST
101: ERETSILKSF KNGHQSDTTT TCPSQDKTPK KPDKVLPCPR CNSMDTKFCY YNNYNVNQPR HFCKHCQRYW TAGGTMRNVP VGAGRRKNKN TPSVSHFRQI
201: MVPEGLQNGS LHGAVLTFGS DSPLCDSMAS VLSLAEKTTQ NGVLNGFHSP NTNTITSNKG DEYYDTVMGS TLSEKRHNAT TSTNSHEKSL DNHKSYHHQG
301: FTPQLCFPGS SSSSPWPYPW NPTKTPSAFC NPVPFYTTQA FWGCMPPPSW SVNYQSAPSS GPNSPTLGKH SRDGDILFQK PSTDMAENNN NNNTVLIPKT
401: LRIDDPTEAA KSSIWSTLGI KNEKGNSLNG GGLFKAFASK GSSDEKKNNH VMMVEASLSP VLQANPAALS RSLVFHERT
101: ERETSILKSF KNGHQSDTTT TCPSQDKTPK KPDKVLPCPR CNSMDTKFCY YNNYNVNQPR HFCKHCQRYW TAGGTMRNVP VGAGRRKNKN TPSVSHFRQI
201: MVPEGLQNGS LHGAVLTFGS DSPLCDSMAS VLSLAEKTTQ NGVLNGFHSP NTNTITSNKG DEYYDTVMGS TLSEKRHNAT TSTNSHEKSL DNHKSYHHQG
301: FTPQLCFPGS SSSSPWPYPW NPTKTPSAFC NPVPFYTTQA FWGCMPPPSW SVNYQSAPSS GPNSPTLGKH SRDGDILFQK PSTDMAENNN NNNTVLIPKT
401: LRIDDPTEAA KSSIWSTLGI KNEKGNSLNG GGLFKAFASK GSSDEKKNNH VMMVEASLSP VLQANPAALS RSLVFHERT
001: MLETKDPAIK LFGMKIPFPT VLEVADEEEE KNQNKTLTDQ SEKDKTLKKP TKILPCPRCN SMETKFCYYN NYNVNQPRHF CKACQRYWTS GGTMRSVPIG
101: AGRRKNKNNS PTSHYHHVTI SETNGPVLSF SLGDDQKVSS NRFGNQKLVA RIENNDERSN NNTSNGLNCF PGVSWPYTWN PAFYPVYPYW SMPVLSSPVS
201: SSPTSTLGKH SRDEDETVKQ KQRNGSVLVP KTLRIDDPNE AAKSSIWTTL GIKNEVMFNG FGSKKEVKLS NKEETETSLV LCANPAALSR SINFHEQM
101: AGRRKNKNNS PTSHYHHVTI SETNGPVLSF SLGDDQKVSS NRFGNQKLVA RIENNDERSN NNTSNGLNCF PGVSWPYTWN PAFYPVYPYW SMPVLSSPVS
201: SSPTSTLGKH SRDEDETVKQ KQRNGSVLVP KTLRIDDPNE AAKSSIWTTL GIKNEVMFNG FGSKKEVKLS NKEETETSLV LCANPAALSR SINFHEQM
Arabidopsis Description
CDF1Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.