Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72477 | Canola | nucleus | 100.0 | 100.0 |
| Bra003994.1-P | Field mustard | nucleus | 76.9 | 73.32 |
| AT1G69570.1 | Thale cress | nucleus | 75.27 | 69.42 |
| Bra024683.1-P | Field mustard | nucleus | 47.55 | 53.52 |
| Bra016286.1-P | Field mustard | nucleus | 42.39 | 46.57 |
| Bra030124.1-P | Field mustard | nucleus | 13.32 | 40.16 |
| Bra029261.1-P | Field mustard | nucleus | 30.71 | 38.7 |
| Bra010848.1-P | Field mustard | nucleus | 17.66 | 37.14 |
| Bra010082.1-P | Field mustard | nucleus | 26.9 | 36.94 |
| Bra032292.1-P | Field mustard | nucleus | 16.3 | 34.29 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 30.16 | 33.84 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 27.72 | 33.77 |
| Bra021895.1-P | Field mustard | nucleus | 15.22 | 33.33 |
| KRH70746 | Soybean | nucleus, plastid | 39.95 | 30.31 |
| KRH74885 | Soybean | nucleus | 39.13 | 30.06 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 30.98 | 29.31 |
| Bra018141.1-P | Field mustard | nucleus | 33.97 | 29.27 |
| Bra028437.1-P | Field mustard | nucleus | 31.79 | 29.25 |
| KRH50577 | Soybean | nucleus | 38.04 | 29.23 |
| GSMUA_Achr11P... | Banana | nucleus | 32.34 | 28.27 |
| KRG89621 | Soybean | nucleus | 36.96 | 28.22 |
| Bra031269.1-P | Field mustard | nucleus | 14.13 | 27.23 |
| Bra030423.1-P | Field mustard | nucleus | 13.59 | 27.03 |
| Bra025655.1-P | Field mustard | nucleus | 32.34 | 26.74 |
| Bra001822.1-P | Field mustard | nucleus | 14.67 | 26.34 |
| Bra023888.1-P | Field mustard | nucleus | 14.13 | 26.0 |
| Bra036082.1-P | Field mustard | nucleus | 15.49 | 25.68 |
| Bra014297.1-P | Field mustard | nucleus | 13.86 | 25.5 |
| Bra011800.1-P | Field mustard | nucleus, plastid | 16.58 | 25.21 |
| Bra012119.1-P | Field mustard | nucleus | 14.67 | 24.55 |
| Bra037135.1-P | Field mustard | nucleus | 14.13 | 24.53 |
| Bra012901.1-P | Field mustard | nucleus | 15.49 | 23.55 |
| Bra030010.1-P | Field mustard | nucleus | 14.95 | 23.4 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 33.15 | 22.68 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 33.15 | 22.63 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 33.15 | 22.63 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 28.26 | 22.37 |
| Bra015609.1-P | Field mustard | nucleus | 13.32 | 21.97 |
| EES02731 | Sorghum | nucleus | 33.15 | 21.79 |
| Zm00001d040362_P001 | Maize | nucleus | 33.15 | 21.33 |
| Os01t0264000-01 | Rice | nucleus | 26.09 | 19.35 |
Protein Annotations
| MapMan:15.5.1.5 | EnsemblPlantsGene:Bra004396 | EnsemblPlants:Bra004396.1 | EnsemblPlants:Bra004396.1-P | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:M4CJL2 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31089 | UniParc:UPI000254189E | InterPro:Znf_Dof | SEG:seg | : | : |
Description
AT1G69570 (E=2e-078) | Dof-type zinc finger domain-containing protein
Coordinates
chrA07:-:18430178..18431464
Molecular Weight (calculated)
40969.5 Da
IEP (calculated)
8.342
GRAVY (calculated)
-0.861
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSKDTEIK LFGTTITSLL AVDHHDPSSL SSIHGVSYQS KEPSSSSSSS CCPSTGPNMV LANNHEHGNS RFKGPCILSD LNEPPRAAFE ISSPTSSKTN
101: GDQQSEITTT TTSTSEDKPT TLKKPDKLLP CPRCESANTK FCYYNNYNVS QPRHFCRNCQ RYWTAGGSMR NVPVGSGRRK NKGWPCSNHY LKVTSEDYEN
201: NNNSGTILSF GSSESSVTET VKHQENKTHQ EFLASQVMLP NNTSPWPYQW SPTGPNTSFY PIPFYWGCTV PIWPISETSP CLGKRARDQT EVETKNTTLR
301: TSEATKNVVY PELPTKPEKN TEGGLSLFNR FETKGSNRRS LVPETSINLQ ENPAAMSRSM NFRESMQQ
101: GDQQSEITTT TTSTSEDKPT TLKKPDKLLP CPRCESANTK FCYYNNYNVS QPRHFCRNCQ RYWTAGGSMR NVPVGSGRRK NKGWPCSNHY LKVTSEDYEN
201: NNNSGTILSF GSSESSVTET VKHQENKTHQ EFLASQVMLP NNTSPWPYQW SPTGPNTSFY PIPFYWGCTV PIWPISETSP CLGKRARDQT EVETKNTTLR
301: TSEATKNVVY PELPTKPEKN TEGGLSLFNR FETKGSNRRS LVPETSINLQ ENPAAMSRSM NFRESMQQ
001: MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS SCSPTIGPIR VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ
Arabidopsis Description
CDF5Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.