Factsheet for Bra032292.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50789	Canola	nucleus	100.0	100.0
CDX99791	Canola	nucleus	96.57	97.69
Bra030124.1-P	Field mustard	nucleus	62.86	90.16
AT1G29160.1	Thale cress	nucleus	88.57	88.57
Bra010848.1-P	Field mustard	nucleus	83.43	83.43
Bra021895.1-P	Field mustard	nucleus	62.86	65.48
VIT_10s0003g01260.t01	Wine grape	nucleus	57.71	63.52
KRH42862	Soybean	nucleus	27.43	61.54
KRH58964	Soybean	nucleus	50.29	53.33
Solyc02g076850.1.1	Tomato	nucleus	49.14	52.76
KRH21283	Soybean	nucleus	44.0	52.38
PGSC0003DMT400087458	Potato	nucleus	49.14	52.12
KRH11011	Soybean	nucleus	44.57	50.98
Bra031269.1-P	Field mustard	nucleus	27.43	25.13
Bra023888.1-P	Field mustard	nucleus	26.29	23.0
Bra029261.1-P	Field mustard	nucleus	38.29	22.95
Bra001822.1-P	Field mustard	nucleus	26.86	22.93
Bra030423.1-P	Field mustard	nucleus	24.0	22.7
Bra036082.1-P	Field mustard	nucleus	28.0	22.07
Bra037135.1-P	Field mustard	nucleus	26.29	21.7
Bra010082.1-P	Field mustard	nucleus	33.14	21.64
Bra011800.1-P	Field mustard	nucleus, plastid	29.14	21.07
Bra014297.1-P	Field mustard	nucleus	24.0	21.0
Bra012119.1-P	Field mustard	nucleus	25.71	20.45
Bra030010.1-P	Field mustard	nucleus	27.43	20.43
Bra012901.1-P	Field mustard	nucleus	28.0	20.25
Bra015609.1-P	Field mustard	nucleus	25.14	19.73
Bra024683.1-P	Field mustard	nucleus	35.43	18.96
Bra016286.1-P	Field mustard	nucleus	33.71	17.61
Bra003994.1-P	Field mustard	nucleus	38.29	17.36
Bra028437.1-P	Field mustard	nucleus	38.86	17.0
Bra004396.1-P	Field mustard	nucleus	34.29	16.3
Bra018141.1-P	Field mustard	nucleus	39.43	16.16
Bra025655.1-P	Field mustard	nucleus	39.43	15.51
TraesCS3D01G193100.1	Wheat	nucleus	40.57	14.92
TraesCS3A01G189600.1	Wheat	nucleus	40.0	14.71
Zm00001d040455_P001	Maize	nucleus	40.0	13.65
Os01t0277500-01	Rice	nucleus	42.86	13.54
EES00579	Sorghum	nucleus	39.43	13.48

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra032292	EnsemblPlants:Bra032292.1	EnsemblPlants:Bra032292.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4EU10	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF14	UniParc:UPI00025426B2	InterPro:Znf_Dof	SEG:seg	:

Description

AT1G29160 (E=3e-077) | Dof-type zinc finger domain-containing protein

Coordinates

chrA09:+:22802511..22803038

Molecular Weight (calculated)

19277.8 Da

IEP (calculated)

9.570

GRAVY (calculated)

-0.691

Length

175 amino acids

Sequence
(BLAST)

001: MASHNSQGIK LFGKTITFNA NNLTHTIKKE EQQQQPEIQT KSAVGSPSSS SDLTAEKRPD KIIACPRCKS METKFCYFNN YNVNQPRHFC KGCQRYWTAG
101: GALRNVPVGA GRRKAKPPGR VGGFEELLGA ATGTGDQVEL DALLVEEWRA AASHGGFRHD FPAKRLRCYT DGQSC

Best Arabidopsis Sequence Match ( AT1G29160.1 )
(BLAST)

001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC

Arabidopsis Description

DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.