Factsheet for Bra010848.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90171	Canola	nucleus	98.86	99.43
CDY43321	Canola	nucleus	97.71	98.28
AT1G29160.1	Thale cress	nucleus	89.14	89.14
Bra030124.1-P	Field mustard	nucleus	61.71	88.52
Bra032292.1-P	Field mustard	nucleus	83.43	83.43
Bra021895.1-P	Field mustard	nucleus	61.71	64.29
VIT_10s0003g01260.t01	Wine grape	nucleus	55.43	61.01
KRH42862	Soybean	nucleus	25.71	57.69
KRH21283	Soybean	nucleus	43.43	51.7
KRH58964	Soybean	nucleus	48.0	50.91
KRH11011	Soybean	nucleus	44.0	50.33
PGSC0003DMT400087458	Potato	nucleus	47.43	50.3
Solyc02g076850.1.1	Tomato	nucleus	46.29	49.69
Bra031269.1-P	Field mustard	nucleus	26.29	24.08
Bra023888.1-P	Field mustard	nucleus	25.71	22.5
Bra001822.1-P	Field mustard	nucleus	25.71	21.95
Bra030423.1-P	Field mustard	nucleus	22.86	21.62
Bra029261.1-P	Field mustard	nucleus	36.0	21.58
Bra010082.1-P	Field mustard	nucleus	32.57	21.27
Bra036082.1-P	Field mustard	nucleus	26.29	20.72
Bra014297.1-P	Field mustard	nucleus	23.43	20.5
Bra037135.1-P	Field mustard	nucleus	24.57	20.28
Bra030010.1-P	Field mustard	nucleus	26.86	20.0
Bra024683.1-P	Field mustard	nucleus	37.14	19.88
Bra011800.1-P	Field mustard	nucleus, plastid	26.86	19.42
Bra012901.1-P	Field mustard	nucleus	26.29	19.01
Bra015609.1-P	Field mustard	nucleus	24.0	18.83
Bra012119.1-P	Field mustard	nucleus	23.43	18.64
Bra016286.1-P	Field mustard	nucleus	35.43	18.51
Bra003994.1-P	Field mustard	nucleus	40.57	18.39
Bra004396.1-P	Field mustard	nucleus	37.14	17.66
Bra028437.1-P	Field mustard	nucleus	38.86	17.0
Bra018141.1-P	Field mustard	nucleus	38.86	15.93
Bra025655.1-P	Field mustard	nucleus	38.86	15.28
TraesCS3D01G193100.1	Wheat	nucleus	40.57	14.92
TraesCS3A01G189600.1	Wheat	nucleus	40.0	14.71
Os01t0277500-01	Rice	nucleus	42.86	13.54
Zm00001d040455_P001	Maize	nucleus	39.43	13.45
EES00579	Sorghum	nucleus	38.86	13.28

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra010848	EnsemblPlants:Bra010848.1	EnsemblPlants:Bra010848.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4D2Z5	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF14	UniParc:UPI00025454B9	InterPro:Znf_Dof	:	:

Description

AT1G29160 (E=1e-085) | Dof-type zinc finger domain-containing protein

Coordinates

chrA08:+:16778155..16778682

Molecular Weight (calculated)

19428.1 Da

IEP (calculated)

9.789

GRAVY (calculated)

-0.539

Length

175 amino acids

Sequence
(BLAST)

001: MATQDSQGIK LFGKTITFNA SNITTTTIKK EVHQQQPELQ ATTDVRSSST DLTAVEKRPD KIIACPRCKS METKFCYFNN YNVKQPRHFC RGCQRYWTAG
101: GALRNVPVGA GRRKAKHPGR VGGFAEFLGA ATGAVDQVEL DALLVEEWRA AASHGGFRHD FPVKRLRCYT DGQSC

Best Arabidopsis Sequence Match ( AT1G29160.1 )
(BLAST)

001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC

Arabidopsis Description

DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.