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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07344 Canola nucleus 100.0 100.0
CDY67869 Canola nucleus 92.49 92.73
Bra004396.1-P Field mustard nucleus 73.32 76.9
AT1G69570.1 Thale cress nucleus 77.72 75.19
Bra024683.1-P Field mustard nucleus 46.89 55.35
Bra016286.1-P Field mustard nucleus 43.26 49.85
Bra030124.1-P Field mustard nucleus 13.73 43.44
Bra029261.1-P Field mustard nucleus 31.09 41.1
Bra010848.1-P Field mustard nucleus 18.39 40.57
Bra010082.1-P Field mustard nucleus 27.46 39.55
Bra032292.1-P Field mustard nucleus 17.36 38.29
GSMUA_Achr5P07660_001 Banana nucleus 27.46 35.1
GSMUA_Achr9P05020_001 Banana nucleus 29.02 34.15
Bra021895.1-P Field mustard nucleus 14.77 33.93
KRH74885 Soybean nucleus 37.82 30.48
Bra018141.1-P Field mustard nucleus 33.68 30.45
KRH70746 Soybean nucleus, plastid 38.08 30.31
KRH50577 Soybean nucleus 36.79 29.65
GSMUA_Achr6P32240_001 Banana nucleus 29.02 28.79
GSMUA_Achr11P... Banana nucleus 31.09 28.5
Bra028437.1-P Field mustard nucleus 29.53 28.5
KRG89621 Soybean nucleus 34.97 28.01
Bra025655.1-P Field mustard nucleus 31.87 27.64
Bra030423.1-P Field mustard nucleus 12.95 27.03
Bra036082.1-P Field mustard nucleus 15.54 27.03
Bra037135.1-P Field mustard nucleus 14.77 26.89
Bra031269.1-P Field mustard nucleus 13.21 26.7
Bra012119.1-P Field mustard nucleus 15.03 26.36
Bra014297.1-P Field mustard nucleus 13.47 26.0
Bra030010.1-P Field mustard nucleus 15.8 25.96
Bra001822.1-P Field mustard nucleus 13.73 25.85
Bra012901.1-P Field mustard nucleus 16.06 25.62
Bra011800.1-P Field mustard nucleus, plastid 16.06 25.62
Bra023888.1-P Field mustard nucleus 13.21 25.5
TraesCS3A01G180600.1 Wheat nucleus 33.16 23.75
TraesCS3D01G185500.2 Wheat nucleus 32.9 23.61
TraesCS3B01G210300.1 Wheat nucleus 32.64 23.38
Bra015609.1-P Field mustard nucleus 13.21 22.87
EES02731 Sorghum nucleus 33.16 22.86
GSMUA_Achr2P11520_001 Banana nucleus 27.46 22.8
Zm00001d040362_P001 Maize nucleus 32.9 22.2
Os01t0264000-01 Rice nucleus 25.91 20.16
Protein Annotations
MapMan:15.5.1.5EnsemblPlantsGene:Bra003994EnsemblPlants:Bra003994.1EnsemblPlants:Bra003994.1-PGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR003851UniProt:M4CIG0PFAM:PD007478PFAM:PF02701ScanProsite:PS01361PFscan:PS50884
PANTHER:PTHR31089UniParc:UPI0002541975InterPro:Znf_DofSEG:seg::
Description
AT1G69570 (E=3e-157) | Dof-type zinc finger domain-containing protein
Coordinates
chrA07:+:16168973..16170686
Molecular Weight (calculated)
42622.2 Da
IEP (calculated)
9.002
GRAVY (calculated)
-0.857
Length
386 amino acids
Sequence
(BLAST)
001: MSKSRDIKLF GTTITSLSAV NHYDPSPLSA AHGGSDQSKE ASSSSSSSCS PSIRPDRVLA DKNEQESSRF KDPYTLSHLN EPPKAASEIL SPLSSKTNTD
101: QQSELTTTST SAADKPTTLK KPDKILPCPR CESANTKFCY YNNYNVSQPR YFCRNCQRYW TAGGSMRNVP VGSGRRKNKG WPSSNHYLHV TSEDYENNNN
201: LGTILSFGSS ESSVTETGKH QPGDTKITAD SASQQHQTGQ GFLPPQVMFP NNSSPWPYQW SPAGPNANFY PIPFYWGCTV PVWPTSETPT CLGKRSRDQT
301: QGGGMRDASI TTRERLVSET LSISEVTKTA VWSPKPERKT EGFSLFNGFE TKGSNRRSFV PETSINLQAN PAAMSRSMNF RENMQQ
Best Arabidopsis Sequence Match ( AT1G69570.1 )
(BLAST)
001: MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS SCSPTIGPIR VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ
Arabidopsis Description
CDF5Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.