Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16193 | Canola | nucleus | 100.0 | 100.0 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 70.95 | 62.37 |
| Bra016286.1-P | Field mustard | nucleus | 63.3 | 61.79 |
| Bra004396.1-P | Field mustard | nucleus | 53.52 | 47.55 |
| Bra003994.1-P | Field mustard | nucleus | 55.35 | 46.89 |
| Bra030124.1-P | Field mustard | nucleus | 15.6 | 41.8 |
| Bra029261.1-P | Field mustard | nucleus | 33.33 | 37.33 |
| Bra010082.1-P | Field mustard | nucleus | 30.58 | 37.31 |
| Bra010848.1-P | Field mustard | nucleus | 19.88 | 37.14 |
| Bra032292.1-P | Field mustard | nucleus | 18.96 | 35.43 |
| Bra021895.1-P | Field mustard | nucleus | 16.82 | 32.74 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 32.11 | 32.01 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 29.36 | 31.79 |
| Bra036082.1-P | Field mustard | nucleus | 18.65 | 27.48 |
| KRH74885 | Soybean | nucleus | 39.14 | 26.72 |
| Bra028437.1-P | Field mustard | nucleus | 32.42 | 26.5 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 31.5 | 26.48 |
| Bra018141.1-P | Field mustard | nucleus | 34.56 | 26.46 |
| KRH50577 | Soybean | nucleus | 38.53 | 26.3 |
| KRH70746 | Soybean | nucleus, plastid | 38.84 | 26.19 |
| GSMUA_Achr11P... | Banana | nucleus | 33.64 | 26.13 |
| Bra030010.1-P | Field mustard | nucleus | 18.35 | 25.53 |
| Bra031269.1-P | Field mustard | nucleus | 14.68 | 25.13 |
| KRG89621 | Soybean | nucleus | 37.0 | 25.1 |
| Bra037135.1-P | Field mustard | nucleus | 15.9 | 24.53 |
| Bra012901.1-P | Field mustard | nucleus | 18.04 | 24.38 |
| Bra025655.1-P | Field mustard | nucleus | 32.72 | 24.04 |
| Bra023888.1-P | Field mustard | nucleus | 14.68 | 24.0 |
| Bra001822.1-P | Field mustard | nucleus | 14.68 | 23.41 |
| Bra030423.1-P | Field mustard | nucleus | 13.15 | 23.24 |
| Bra011800.1-P | Field mustard | nucleus, plastid | 16.82 | 22.73 |
| Bra014297.1-P | Field mustard | nucleus | 13.76 | 22.5 |
| Bra012119.1-P | Field mustard | nucleus | 14.98 | 22.27 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 29.97 | 21.08 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 33.33 | 20.22 |
| Bra015609.1-P | Field mustard | nucleus | 13.76 | 20.18 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 33.03 | 20.07 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 33.03 | 20.04 |
| EES02731 | Sorghum | nucleus | 33.95 | 19.82 |
| Zm00001d040362_P001 | Maize | nucleus | 33.64 | 19.23 |
| Os01t0264000-01 | Rice | nucleus | 28.44 | 18.75 |
Protein Annotations
| MapMan:15.5.1.5 | EnsemblPlantsGene:Bra024683 | EnsemblPlants:Bra024683.1 | EnsemblPlants:Bra024683.1-P | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:M4E7C8 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31089 | UniParc:UPI000254281B | InterPro:Znf_Dof | SEG:seg | : | : |
Description
AT1G26790 (E=3e-103) | Dof-type zinc finger domain-containing protein
Coordinates
chrA09:-:23533869..23535070
Molecular Weight (calculated)
37135.7 Da
IEP (calculated)
7.432
GRAVY (calculated)
-0.876
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELIDTPVK LFGWTITSSL SLTNNQSATD NIEQASTSLQ RSSDLTEESK ETSENSEITT TTTTSEEKTT DDLKKPDKIL PCPRCNSSDT KFCYYNNYNV
101: SQPRHFCRSC QRYWTSGGTM RIVPVGSGRR KNKGWVSTHH YMHTENTRSS EKILSFDSSG EESLVTENGK NQSSDSVSRD FNNFQRFLPP QVTSSVSPPW
201: PYPAFYHIPV YWGCTVPFWS TLQTSTCLGK RTRDEASHVS VGENEDTSVR ARLDSQSRSN NDEANVATKN RVFYPVPMKR EKTQQFNLFV NESETKSGNN
301: RFVPETYLNL QANPAAMSRS MNFRESM
101: SQPRHFCRSC QRYWTSGGTM RIVPVGSGRR KNKGWVSTHH YMHTENTRSS EKILSFDSSG EESLVTENGK NQSSDSVSRD FNNFQRFLPP QVTSSVSPPW
201: PYPAFYHIPV YWGCTVPFWS TLQTSTCLGK RTRDEASHVS VGENEDTSVR ARLDSQSRSN NDEANVATKN RVFYPVPMKR EKTQQFNLFV NESETKSGNN
301: RFVPETYLNL QANPAAMSRS MNFRESM
001: MSSKIGMSQV RDTPVKLFGW TITPVSHDPY SSSSHVLPDS SSSSSSSSLS LRPHMMNNQS VTDNTSLKLS SNLNNESKET SENSDDQHSE ITTITSEEEK
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G26790]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.