CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93541	Soybean	nucleus	70.29	89.09
KRH01188	Soybean	nucleus	64.96	63.27
KRH40083	Soybean	nucleus	64.75	62.82
VIT_17s0000g06310.t01	Wine grape	nucleus	51.02	52.64
VIT_01s0026g02580.t01	Wine grape	nucleus	50.61	51.78
KRH42862	Soybean	nucleus	7.79	48.72
KRH03487	Soybean	nucleus	45.7	47.35
KRH56903	Soybean	nucleus	45.29	46.72
KRH54567	Soybean	nucleus	43.24	46.07
KRH63324	Soybean	nucleus	44.26	45.96
KRH21283	Soybean	nucleus	12.91	42.86
KRH58964	Soybean	nucleus	14.34	42.42
KRH11011	Soybean	nucleus	13.11	41.83
KRH74885	Soybean	nucleus	40.98	41.75
KRH50577	Soybean	nucleus	40.98	41.75
KRG89621	Soybean	nucleus	40.98	41.49
KRH70746	Soybean	nucleus, plastid	40.78	41.03
EER95426	Sorghum	nucleus	33.4	38.44
Os03t0169600-01	Rice	nucleus	34.02	37.73
TraesCS4A01G017700.1	Wheat	nucleus	33.61	37.53
Zm00001d027846_P001	Maize	nucleus	33.2	37.5
TraesCS4B01G286400.1	Wheat	nucleus	33.2	37.41
TraesCS4D01G285100.1	Wheat	nucleus	33.61	37.1
HORVU4Hr1G074990.1	Barley	nucleus	33.2	36.65
KRH64974	Soybean	nucleus	33.4	35.36
Os07t0685000-02	Rice	nucleus	34.43	35.29
KRG94921	Soybean	nucleus	34.63	34.99
OQU90492	Sorghum	nucleus	34.43	34.71
HORVU2Hr1G017290.1	Barley	nucleus	33.2	34.11
TraesCS2A01G100800.1	Wheat	nucleus	33.4	34.03
TraesCS2B01G118000.1	Wheat	nucleus	32.79	33.4
KRH44749	Soybean	nucleus	29.51	33.18
Zm00001d022525_P001	Maize	nucleus	34.43	32.62
TraesCS2D01G100300.1	Wheat	mitochondrion, nucleus	33.4	32.53
KRH09992	Soybean	nucleus	13.93	32.23
KRH13096	Soybean	nucleus, vacuole	30.33	31.76
KRH44186	Soybean	nucleus	13.73	31.46
KRH47156	Soybean	nucleus	13.52	31.28
KRH23341	Soybean	nucleus	13.52	31.13
KRH70017	Soybean	nucleus	14.14	29.49
KRH08373	Soybean	nucleus	13.32	27.54

Protein Annotations

EntrezGene:100775675	MapMan:15.5.1.5	EMBL:ACUP02008076	EnsemblPlantsGene:GLYMA_13G062500	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:I1LWK9	InterPro:IPR003851	EnsemblPlants:KRH18471	ProteinID:KRH18471	ProteinID:KRH18471.1	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	UniParc:UPI00023D0801	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:16016181..16019533

Molecular Weight (calculated)

53323.1 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.729

Length

488 amino acids

Sequence
(BLAST)

001: MLEAKDSTMM KLFGNTIPAP EIPAGAPAFS SGDVFGDSVG QNRGSSSVNG DGEEHEIQQD IMGEETTESK KEDEVTNLDT VSRSGEGSIN PSTEKEDLTL
101: KTSKKTEQEQ GENSQNKTLR KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCKNCQRYW TAGGVMRNVP VGAGRRKNKN FASQYRHITV PEAALSSSQP
201: DLSNGVSNPS LNCNATLLAY GSDRPLCESM TSVLNLADKA VNNSTTNGFN GSEELEIPVT YVGGEKVNDD SNKSSDTSTK PMKGETTNRS QEQVIENCHP
301: FPPHVPYFPG APWPFPWNPA PWNSPVPLPP PFFPQGFTMP LYPAAAYWSL TIPGARSIPW LAQPSLLNST VSNSGPNSLT LGKHSREENM HKSNGVAVED
401: EHSKENNKEK CLWVPKTLRI DDLGEAAKTS IWTTLGIKNN KADLFPGGGL FKSLPSQGGE KNRVIKNSPV LHANPAALSR SINFQETS

Best Arabidopsis Sequence Match ( AT5G39660.3 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.