CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039482_P001	Maize	nucleus	81.7	83.12
TraesCS3D01G108600.1	Wheat	nucleus	47.66	48.7
TraesCS3B01G125100.1	Wheat	nucleus	45.53	46.52
TraesCS3A01G106500.1	Wheat	nucleus	45.53	44.96
VIT_03s0063g01350.t01	Wine grape	nucleus	25.96	35.26
VIT_07s0255g00020.t01	Wine grape	nucleus	31.91	34.09
Solyc04g079570.1.1	Tomato	nucleus	34.47	33.89
PGSC0003DMT400030496	Potato	nucleus	28.09	33.67
CDY58082	Canola	nucleus	29.36	33.5
CDY20892	Canola	nucleus	29.36	33.5
VIT_18s0001g11310.t01	Wine grape	nucleus	31.91	33.19
PGSC0003DMT400034111	Potato	nucleus	27.23	32.99
PGSC0003DMT400026137	Potato	nucleus	32.77	32.08
Bra015609.1-P	Field mustard	nucleus	30.21	31.84
CDY18628	Canola	nucleus	28.51	31.6
Bra037135.1-P	Field mustard	nucleus	28.51	31.6
AT1G47655.1	Thale cress	nucleus	28.09	31.58
CDY52832	Canola	nucleus	29.79	31.53
Bra036082.1-P	Field mustard	nucleus	29.79	31.53
CDY12790	Canola	nucleus	28.94	31.05
CDY17783	Canola	nucleus	30.21	31.0
CDY02086	Canola	nucleus	31.91	30.99
CDY23010	Canola	nucleus	32.34	30.77
CDX83127	Canola	nucleus	30.64	30.64
Bra030010.1-P	Field mustard	nucleus	30.64	30.64
Bra012901.1-P	Field mustard	nucleus	31.49	30.58
CDY54696	Canola	nucleus	30.64	30.25
Solyc02g065290.1.1	Tomato	nucleus	25.96	30.05
AT3G50410.1	Thale cress	nucleus	32.34	30.04
Bra012119.1-P	Field mustard	nucleus	28.09	30.0
CDX81350	Canola	nucleus	28.51	29.91
Solyc02g090220.2.1	Tomato	nucleus	32.77	29.84
CDY17009	Canola	nucleus	28.94	29.57
CDY01450	Canola	nucleus	27.66	29.55
KRH08373	Soybean	nucleus	28.94	28.81
KRH70017	Soybean	nucleus	28.51	28.63
AT5G66940.1	Thale cress	nucleus	27.23	28.44
EES13107	Sorghum	nucleus	23.4	24.55
OQU87316	Sorghum	nucleus	14.47	20.24
OQU81009	Sorghum	nucleus	22.13	19.62
KXG33408	Sorghum	nucleus	21.7	19.62
OQU78298	Sorghum	mitochondrion, nucleus, plastid	17.45	18.98
OQU89656	Sorghum	nucleus	19.15	17.86
EES17301	Sorghum	nucleus	19.57	16.73
EER91220	Sorghum	plastid	21.7	14.53
EER95426	Sorghum	nucleus	22.55	12.5
EER91636	Sorghum	nucleus	24.26	11.97
OQU90492	Sorghum	nucleus	20.85	10.12
EES00579	Sorghum	nucleus	20.43	9.38
EES02731	Sorghum	nucleus	20.0	8.39

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1B6Q141	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	EnsemblPlants:KXG31638
ProteinID:KXG31638	ProteinID:KXG31638.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF74	EnsemblPlantsGene:SORBI_3003G033500	UniParc:UPI00081AC0E0	InterPro:Znf_Dof	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:3066533..3067815

Molecular Weight (calculated)

24115.0 Da

IEP (calculated)

10.180

GRAVY (calculated)

-0.126

Length

235 amino acids

Sequence
(BLAST)

001: MVRSAAAMEA GQVPDGRALM AAVTTTGGGG REPEGLPCPR CESVNTKFCY YNNYNLSQPR YFCKTCRRYW TRGGALRNVP VGGNTRKATP ATGRRKRSTP
101: APVNVTVPAP ATASPPPPPA LHGGSLLRPY GGGGGSGLLS FAAPALASPL AAADPDRRLL DFGGSFTSLI APGVADVGVH FSAGFLMGGL APAALPRAPG
201: SVAALPPPPP QQQPTVSQAL PEGMVWSMGW PDLSI

Best Arabidopsis Sequence Match ( AT1G51700.1 )
(BLAST)

001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN

Arabidopsis Description

DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.