Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- nucleus 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010740_P001 | Maize | nucleus | 81.02 | 82.55 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 28.7 | 52.1 |
| TraesCS1B01G347400.1 | Wheat | plastid | 49.07 | 50.72 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 34.26 | 49.66 |
| TraesCS1A01G334100.1 | Wheat | nucleus, plastid | 47.69 | 49.28 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 33.8 | 48.34 |
| TraesCS1D01G336600.1 | Wheat | nucleus, plastid | 47.69 | 48.13 |
| HORVU1Hr1G076800.1 | Barley | nucleus | 46.76 | 43.35 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 29.17 | 40.91 |
| KXG33408 | Sorghum | nucleus | 38.89 | 32.31 |
| OQU87316 | Sorghum | nucleus | 23.15 | 29.76 |
| EES13107 | Sorghum | nucleus | 19.44 | 18.75 |
| KXG31638 | Sorghum | nucleus | 18.98 | 17.45 |
| OQU89656 | Sorghum | nucleus | 19.91 | 17.06 |
| OQU81009 | Sorghum | nucleus | 20.37 | 16.6 |
| EES17301 | Sorghum | nucleus | 19.44 | 15.27 |
| EER95426 | Sorghum | nucleus | 28.24 | 14.39 |
| EER91220 | Sorghum | plastid | 22.22 | 13.68 |
| EER91636 | Sorghum | nucleus | 29.17 | 13.24 |
| EES00579 | Sorghum | nucleus | 30.56 | 12.89 |
| EES02731 | Sorghum | nucleus | 30.56 | 11.79 |
| OQU90492 | Sorghum | nucleus | 24.54 | 10.95 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A1Z5R3D7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EnsemblPlants:OQU78298 |
| ProteinID:OQU78298 | ProteinID:OQU78298.1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31089 | PANTHER:PTHR31089:SF16 | EnsemblPlantsGene:SORBI_3009G196100 | UniParc:UPI0001A88B6F | RefSeq:XP_002440070.1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:54684675..54686240
Molecular Weight (calculated)
22784.9 Da
IEP (calculated)
10.298
GRAVY (calculated)
-0.343
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MPARAAAACT GAAGIKLFGK VITTQPPQQP MQHAPPRLQQ QQASSGRGNN ADLLEEVARA RAAAAEVRLP CPRCLSRDTK FCYFNNYNVN QPRHFCRACH
101: RYWTAGGAIR NVPIGSGRRK NRPVLLPPPA PHHAATATAS SADDNDHRSG SGSPPVFTSV FTAPYLGGSP SQFTTSPAYA AAAAAAAGHP GTTTGQCLWL
201: VATTDRPVAS DRAFLI
101: RYWTAGGAIR NVPIGSGRRK NRPVLLPPPA PHHAATATAS SADDNDHRSG SGSPPVFTSV FTAPYLGGSP SQFTTSPAYA AAAAAAAGHP GTTTGQCLWL
201: VATTDRPVAS DRAFLI
001: MATQDSQGIK LFGKTIAFNT RTIKNEEETH PPEQEATIAV RSSSSSDLTA EKRPDKIIAC PRCKSMETKF CYFNNYNVNQ PRHFCKGCHR YWTAGGALRN
101: VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG SFRHDFPMKR LRCYSDGQSC
101: VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG SFRHDFPMKR LRCYSDGQSC
Arabidopsis Description
CDF4Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.