CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031278_P001	Maize	nucleus	74.34	82.08
Os08t0490100-01	Rice	nucleus	60.0	57.61
OQU89656	Sorghum	nucleus	47.55	50.0
EES17301	Sorghum	nucleus	27.55	26.55
OQU87316	Sorghum	nucleus	16.23	25.6
EER91220	Sorghum	plastid	29.81	22.51
KXG31638	Sorghum	nucleus	19.62	22.13
OQU78298	Sorghum	mitochondrion, nucleus, plastid	16.6	20.37
EES13107	Sorghum	nucleus	16.6	19.64
KXG33408	Sorghum	nucleus	17.36	17.69
EER95426	Sorghum	nucleus	22.64	14.15
EER91636	Sorghum	nucleus	23.4	13.03
EES02731	Sorghum	nucleus	24.91	11.79
OQU90492	Sorghum	nucleus	21.51	11.78
EES00579	Sorghum	nucleus	19.62	10.16

Protein Annotations

MapMan:15.5.1.5	EntrezGene:8055366	UniProt:A0A1Z5RBP3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
EnsemblPlants:OQU81009	ProteinID:OQU81009	ProteinID:OQU81009.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361
PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF68	EnsemblPlantsGene:SORBI_3007G223200	UniParc:UPI0001A87AB8	RefSeq:XP_002445972.1
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:65078570..65080375

Molecular Weight (calculated)

27580.9 Da

IEP (calculated)

6.132

GRAVY (calculated)

-0.419

Length

265 amino acids

Sequence
(BLAST)

001: MQEVSVEPGR RPAQQPHHQF AGVDLRRPKG YATAPVQEAT PAVKVAEGGD PCPRCASRDT KFCYYNNYNT SQPRHFCKGC RRYWTKGGTL RNVPVGGGTR
101: KKPSSSSYAA AAAAAADADN KPPKKKPASK KRRVEAPVPE PAAAADASGV TDTVAAADSA KTTTTTTTTT TDGASEITTE TEAAVAVAVP VAEEDSESLA
201: HLLLQPGAEE AVSLGLGLSD FPSAAGKAVL DDDSFVWPAA FDLGTCWASA GFADTDPASL FLNLP

Best Arabidopsis Sequence Match ( AT1G21340.1 )
(BLAST)

001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI

Arabidopsis Description

DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.