Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18628 | Canola | nucleus | 85.71 | 90.57 |
| CDY01450 | Canola | nucleus | 78.57 | 80.0 |
| CDY12790 | Canola | nucleus | 78.12 | 79.91 |
| AT5G66940.1 | Thale cress | nucleus | 76.34 | 76.0 |
| CDY02086 | Canola | nucleus | 58.93 | 54.55 |
| CDY17783 | Canola | nucleus | 55.36 | 54.15 |
| CDY52832 | Canola | nucleus | 51.79 | 52.25 |
| CDY54696 | Canola | nucleus | 55.36 | 52.1 |
| CDX83127 | Canola | nucleus | 54.46 | 51.91 |
| CDY23010 | Canola | nucleus | 57.14 | 51.82 |
| PGSC0003DMT400026137 | Potato | nucleus | 45.54 | 42.5 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 31.7 | 41.04 |
| Solyc02g090220.2.1 | Tomato | nucleus | 43.75 | 37.98 |
| CDY20892 | Canola | nucleus | 33.48 | 36.41 |
| CDY58082 | Canola | nucleus | 33.04 | 35.92 |
| CDY56923 | Canola | nucleus | 27.68 | 33.33 |
| CDY43923 | Canola | nucleus | 23.66 | 32.92 |
| CDY17009 | Canola | nucleus | 33.48 | 32.61 |
| CDY51457 | Canola | nucleus | 27.23 | 31.94 |
| CDX87836 | Canola | nucleus | 25.89 | 31.87 |
| CDY71347 | Canola | nucleus | 18.75 | 31.82 |
| CDY52953 | Canola | nucleus | 27.23 | 31.44 |
| CDY46544 | Canola | nucleus | 27.23 | 30.5 |
| CDY48879 | Canola | nucleus | 27.68 | 30.1 |
| CDY37299 | Canola | nucleus | 26.79 | 30.0 |
| CDY69021 | Canola | nucleus | 26.34 | 29.95 |
| CDY32420 | Canola | nucleus | 27.23 | 29.61 |
| Zm00001d039482_P001 | Maize | nucleus | 29.91 | 29.0 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 29.46 | 28.7 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 29.46 | 28.7 |
| KXG31638 | Sorghum | nucleus | 29.91 | 28.51 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 28.57 | 26.89 |
| CDX99791 | Canola | nucleus | 20.54 | 26.59 |
| CDY50789 | Canola | nucleus | 20.54 | 26.29 |
| CDY15647 | Canola | nucleus | 20.09 | 25.42 |
| CDY43321 | Canola | nucleus | 19.64 | 25.29 |
| CDX90171 | Canola | nucleus | 19.64 | 25.29 |
| CDY37670 | Canola | nucleus | 18.3 | 24.4 |
| CDY67393 | Canola | nucleus | 18.3 | 24.12 |
| CDX69349 | Canola | nucleus, plastid | 24.11 | 22.31 |
| CDX75689 | Canola | nucleus, plastid | 23.66 | 21.9 |
| CDY00286 | Canola | nucleus | 21.43 | 17.58 |
| CDY69084 | Canola | nucleus | 21.43 | 17.52 |
| CDY69244 | Canola | nucleus | 22.77 | 17.47 |
| CDY67518 | Canola | nucleus | 22.77 | 17.47 |
| CDY44994 | Canola | nucleus | 20.98 | 17.41 |
| CDY46443 | Canola | nucleus | 24.11 | 16.12 |
| CDY16193 | Canola | nucleus | 23.21 | 15.9 |
| CDY50734 | Canola | nucleus | 18.75 | 15.5 |
| CDY07344 | Canola | nucleus | 25.45 | 14.77 |
| CDX95919 | Canola | nucleus | 24.11 | 14.67 |
| CDY50735 | Canola | extracellular | 23.66 | 14.56 |
| CDY67869 | Canola | nucleus | 25.0 | 14.55 |
| CDY01768 | Canola | nucleus | 23.66 | 14.4 |
| CDY72477 | Canola | nucleus | 23.21 | 14.13 |
| CDY66672 | Canola | nucleus | 25.45 | 13.35 |
| CDY47405 | Canola | nucleus | 25.45 | 13.29 |
| CDX74440 | Canola | nucleus | 24.11 | 12.74 |
| CDY37010 | Canola | nucleus | 21.43 | 12.31 |
| CDX67434 | Canola | nucleus | 23.21 | 12.29 |
| CDY30261 | Canola | nucleus | 24.11 | 12.27 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CWW6 | EnsemblPlants:CDX81350 | ProteinID:CDX81350 | ProteinID:CDX81350.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00134902001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EEE346 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC09g07610D
Coordinates
chrLK031824:+:1144131..1144805
Molecular Weight (calculated)
23799.5 Da
IEP (calculated)
8.953
GRAVY (calculated)
-0.511
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDLNDSRR VTTKVPHGGA AAEQQEQLPC PRCESTNTKF CYYNNYNFSQ PRHFCKSCRR YWTHGGTLRD IPVGGVSRKS SKRSRAFSSV AAGSRNFPLQ
101: ATPVPFPPSS YGGGITAAKG NTSSLYGGFT TLLNNNAAAS RHGPGGGFNG PGNGPDGFGL GLGHGSYFEE VRFGQGITVW PFSTGATDAN VADTSHAAPV
201: HATWQLEGLE SKVGFVAGDY LAWD
101: ATPVPFPPSS YGGGITAAKG NTSSLYGGFT TLLNNNAAAS RHGPGGGFNG PGNGPDGFGL GLGHGSYFEE VRFGQGITVW PFSTGATDAN VADTSHAAPV
201: HATWQLEGLE SKVGFVAGDY LAWD
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.