Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037135.1-P | Field mustard | nucleus | 98.58 | 98.58 |
| CDX81350 | Canola | nucleus | 90.57 | 85.71 |
| CDY01450 | Canola | nucleus | 81.13 | 78.18 |
| CDY12790 | Canola | nucleus | 80.19 | 77.63 |
| AT5G66940.1 | Thale cress | nucleus | 76.89 | 72.44 |
| CDY02086 | Canola | nucleus | 62.26 | 54.55 |
| CDY54696 | Canola | nucleus | 58.96 | 52.52 |
| CDX83127 | Canola | nucleus | 58.02 | 52.34 |
| CDY23010 | Canola | nucleus | 60.85 | 52.23 |
| CDY17783 | Canola | nucleus | 56.13 | 51.97 |
| CDY52832 | Canola | nucleus | 52.83 | 50.45 |
| PGSC0003DMT400026137 | Potato | nucleus | 46.7 | 41.25 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 32.55 | 39.88 |
| Solyc02g090220.2.1 | Tomato | nucleus | 45.75 | 37.6 |
| CDY20892 | Canola | nucleus | 33.96 | 34.95 |
| CDY58082 | Canola | nucleus | 33.49 | 34.47 |
| CDY43923 | Canola | nucleus | 25.0 | 32.92 |
| CDY56923 | Canola | nucleus | 28.77 | 32.8 |
| CDX87836 | Canola | nucleus | 27.83 | 32.42 |
| CDY17009 | Canola | nucleus | 34.91 | 32.17 |
| CDY51457 | Canola | nucleus | 28.3 | 31.41 |
| CDY71347 | Canola | nucleus | 19.34 | 31.06 |
| CDY52953 | Canola | nucleus | 28.3 | 30.93 |
| CDY46544 | Canola | nucleus | 28.3 | 30.0 |
| CDY48879 | Canola | nucleus | 28.77 | 29.61 |
| CDY37299 | Canola | nucleus | 27.83 | 29.5 |
| CDY69021 | Canola | nucleus | 27.36 | 29.44 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 31.6 | 29.13 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 31.6 | 29.13 |
| CDY32420 | Canola | nucleus | 28.3 | 29.13 |
| Zm00001d039482_P001 | Maize | nucleus | 31.6 | 29.0 |
| KXG31638 | Sorghum | nucleus | 31.6 | 28.51 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 30.66 | 27.31 |
| CDX99791 | Canola | nucleus | 21.7 | 26.59 |
| CDY50789 | Canola | nucleus | 21.7 | 26.29 |
| CDY43321 | Canola | nucleus | 20.75 | 25.29 |
| CDX90171 | Canola | nucleus | 20.75 | 25.29 |
| CDY37670 | Canola | nucleus | 19.81 | 25.0 |
| CDY15647 | Canola | nucleus | 20.75 | 24.86 |
| CDY67393 | Canola | nucleus | 19.81 | 24.71 |
| CDX69349 | Canola | nucleus, plastid | 25.94 | 22.73 |
| CDX75689 | Canola | nucleus, plastid | 25.47 | 22.31 |
| CDY44994 | Canola | nucleus | 22.17 | 17.41 |
| CDY00286 | Canola | nucleus | 21.7 | 16.85 |
| CDY69084 | Canola | nucleus | 21.7 | 16.79 |
| CDY69244 | Canola | nucleus | 23.11 | 16.78 |
| CDY67518 | Canola | nucleus | 23.11 | 16.78 |
| CDY46443 | Canola | nucleus | 25.0 | 15.82 |
| CDY16193 | Canola | nucleus | 24.06 | 15.6 |
| CDY50734 | Canola | nucleus | 19.81 | 15.5 |
| CDY07344 | Canola | nucleus | 26.42 | 14.51 |
| CDX95919 | Canola | nucleus | 25.0 | 14.4 |
| CDY67869 | Canola | nucleus | 25.94 | 14.29 |
| CDY50735 | Canola | extracellular | 24.53 | 14.29 |
| CDY01768 | Canola | nucleus | 24.53 | 14.13 |
| CDY72477 | Canola | nucleus | 24.06 | 13.86 |
| CDY66672 | Canola | nucleus | 26.42 | 13.11 |
| CDY47405 | Canola | nucleus | 26.42 | 13.05 |
| CDX74440 | Canola | nucleus | 25.0 | 12.5 |
| CDX67434 | Canola | nucleus | 24.06 | 12.06 |
| CDY37010 | Canola | nucleus | 22.17 | 12.05 |
| CDY30261 | Canola | nucleus | 25.0 | 12.05 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078G1X4 | UniProt:A0A078G1X4 | EnsemblPlants:CDY18628 | ProteinID:CDY18628 | ProteinID:CDY18628.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00005690001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EF18CE | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g07670DBnaA09g07670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1X4]
Coordinates
chrLK032087:-:232026..232664
Molecular Weight (calculated)
22463.2 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.394
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDLNASCR VTTKLPHGGA AAEQQEQLPC PRCESTNTKF CYYNNYNFSQ PRHFCKSCRR YWTHGGTLRD IPVGGVSRKT SKRSRAFSSV AAAGSRNFPL
101: QATPVLFPPS SYGGGKGNTS SLYGGFTTLL GNNAAASRDG PGGGFNGPEG FGLGLGHGLY LDDVRFGQGI TAWPFSTGAT DAATSHVVPI HATWQLEGTE
201: SRVGFVAGDY LA
101: QATPVLFPPS SYGGGKGNTS SLYGGFTTLL GNNAAASRDG PGGGFNGPEG FGLGLGHGLY LDDVRFGQGI TAWPFSTGAT DAATSHVVPI HATWQLEGTE
201: SRVGFVAGDY LA
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.