Factsheet for TraesCS7A01G229400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G230000.1	Wheat	cytosol	100.0	100.0
TraesCS7B01G195200.1	Wheat	cytosol	99.44	99.44
HORVU7Hr1G046660.6	Barley	cytosol	87.22	86.26
Os06t0498800-01	Rice	cytosol, extracellular, plastid	81.11	82.95
KXG19938	Sorghum	cytosol	78.33	77.9
GSMUA_Achr6P09410_001	Banana	cytosol	68.33	71.51
Zm00001d037439_P001	Maize	extracellular	78.33	71.21
GSMUA_Achr3P20880_001	Banana	cytosol	67.78	70.93
GSMUA_AchrUn_...	Banana	cytosol	66.11	69.19
TraesCS3A01G006600.1	Wheat	cytosol	64.44	66.29
AT1G18100.1	Thale cress	cytosol	62.78	65.32
CDY21719	Canola	cytosol	62.22	64.74
CDX81861	Canola	cytosol	62.22	64.74
Bra031016.1-P	Field mustard	cytosol	62.22	64.74
VIT_17s0000g02630.t01	Wine grape	cytosol	61.11	63.95
CDY60777	Canola	cytosol	61.67	63.79
Bra025930.1-P	Field mustard	cytosol	61.11	63.58
CDY26185	Canola	cytosol	61.11	63.58
Solyc03g119100.1.1	Tomato	cytosol	58.33	60.69
PGSC0003DMT400014409	Potato	cytosol	58.33	60.69
KRH41796	Soybean	cytosol	31.67	57.58
KRH60500	Soybean	endoplasmic reticulum	59.44	56.32
TraesCS4A01G409200.1	Wheat	cytosol	50.56	52.0
TraesCS7A01G115400.1	Wheat	cytosol	50.0	51.14
TraesCS5A01G128600.1	Wheat	cytosol	47.78	49.71
TraesCS3A01G143100.1	Wheat	cytosol, mitochondrion	49.44	48.9
TraesCS2A01G485000.1	Wheat	cytosol	45.56	47.95
TraesCS2A01G536600.1	Wheat	cytosol	45.0	46.82
TraesCS2A01G536700.1	Wheat	cytosol	45.0	46.82
TraesCS2A01G536900.1	Wheat	cytosol	45.0	46.82
TraesCS6A01G214400.1	Wheat	cytosol	45.0	46.55
TraesCS2A01G347000.1	Wheat	cytosol	44.44	45.98
TraesCS3A01G013100.1	Wheat	cytosol	44.44	45.71
TraesCS2A01G132300.1	Wheat	cytosol	42.22	43.93
TraesCS5A01G546900.1	Wheat	cytosol	43.33	43.82
TraesCS6A01G160200.1	Wheat	cytosol	43.89	43.17
TraesCS5A01G546800.1	Wheat	cytosol	42.22	41.76
TraesCS1A01G338600.1	Wheat	cytosol	41.67	41.67
TraesCS5A01G154600.1	Wheat	cytosol	41.11	41.57
TraesCS7A01G355100.1	Wheat	cytosol	21.67	39.39
TraesCS5A01G297300.1	Wheat	cytosol	43.89	38.73

Protein Annotations

EnsemblPlants:TraesCS7A01G229400.1	EnsemblPlantsGene:TraesCS7A01G229400	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF42	PFAM:PF01161	ScanProsite:PS01220
SUPFAM:SSF49777	TIGR:cd00866	MapMan:27.8.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:199671796..199673399

Molecular Weight (calculated)

19519.7 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.095

Length

180 amino acids

Sequence
(BLAST)

001: MAAHVDPLVV GRVIGDVVDM FVPTMPVTVR FGTKDLTNGC EIKPSIADAA PSIQIAGRAG DLFTLVMTDP DAPSPSEPTM KEWLHWLVVN IPGGSDPSQG
101: EEVVPYMGPK PPLGIHRYVL VLFQQKARVL APAPGGDTAA SAMRARFSTR AFAERHDLGL PVAAMYFNAQ KEPANRRRRY

Best Arabidopsis Sequence Match ( AT1G18100.1 )
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR

Arabidopsis Description

MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.