Factsheet for GSMUA_Achr3P20880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P09410_001	Banana	cytosol	85.47	85.47
GSMUA_AchrUn_...	Banana	cytosol	83.72	83.72
EES02614	Sorghum	cytosol	70.35	70.76
Os06t0498800-01	Rice	cytosol, extracellular, plastid	72.09	70.45
TraesCS7A01G229400.1	Wheat	cytosol, golgi	70.93	67.78
TraesCS7D01G230000.1	Wheat	cytosol	70.93	67.78
TraesCS3B01G007400.1	Wheat	cytosol	66.28	67.46
Os01t0111600-01	Rice	cytosol	68.02	67.24
TraesCS7B01G195200.1	Wheat	cytosol	70.35	67.22
CDY21719	Canola	cytosol	67.44	67.05
CDX81861	Canola	cytosol	67.44	67.05
Bra031016.1-P	Field mustard	cytosol	67.44	67.05
AT1G18100.1	Thale cress	cytosol	67.44	67.05
TraesCS3B01G010100.1	Wheat	cytosol	68.02	66.86
Zm00001d040113_P003	Maize	cytosol	69.77	66.67
TraesCS3A01G006600.1	Wheat	cytosol	67.44	66.29
KXG19938	Sorghum	cytosol	69.19	65.75
CDY60777	Canola	cytosol	65.7	64.94
Bra025930.1-P	Field mustard	cytosol	64.53	64.16
CDY26185	Canola	cytosol	64.53	64.16
VIT_17s0000g02630.t01	Wine grape	cytosol	63.37	63.37
HORVU7Hr1G046660.6	Barley	cytosol	66.86	63.19
KRH41796	Soybean	cytosol	35.47	61.62
TraesCS3D01G004100.1	Wheat	cytosol	68.6	60.82
Solyc03g119100.1.1	Tomato	cytosol	61.05	60.69
PGSC0003DMT400014409	Potato	cytosol	61.05	60.69
KRH60500	Soybean	endoplasmic reticulum	66.86	60.53
HORVU3Hr1G001000.2	Barley	cytosol	67.44	60.1
Zm00001d037439_P001	Maize	extracellular	67.44	58.59
Zm00001d008446_P006	Maize	cytosol	68.6	56.73
GSMUA_Achr3P03070_001	Banana	cytosol	54.07	53.76
GSMUA_Achr3P22720_001	Banana	cytosol	52.91	52.3
GSMUA_Achr10P...	Banana	cytosol	52.91	52.3
GSMUA_Achr10P...	Banana	cytosol	52.33	52.02
GSMUA_Achr5P20040_001	Banana	cytosol	52.33	52.02
GSMUA_Achr11P...	Banana	cytosol	51.74	51.45
GSMUA_Achr8P07730_001	Banana	cytosol	52.33	51.43
GSMUA_Achr2P19310_001	Banana	cytosol	51.74	50.86
GSMUA_Achr2P20900_001	Banana	cytosol	51.16	50.57
GSMUA_Achr10P...	Banana	cytosol	51.16	49.72
GSMUA_Achr9P07900_001	Banana	cytosol	49.42	48.85
GSMUA_Achr10P...	Banana	cytosol	49.42	48.85
GSMUA_Achr4P08540_001	Banana	cytosol	50.58	48.6
GSMUA_Achr10P...	Banana	cytosol	48.84	47.46
GSMUA_Achr2P05870_001	Banana	cytosol	50.58	47.03
GSMUA_Achr3P02730_001	Banana	cytosol	48.26	46.37
GSMUA_Achr5P06600_001	Banana	cytosol	47.09	46.29
GSMUA_Achr5P06420_001	Banana	cytosol	47.09	46.29
GSMUA_Achr3P21510_001	Banana	cytosol	46.51	46.24
GSMUA_Achr2P19360_001	Banana	cytosol	47.09	45.76
GSMUA_Achr1P17050_001	Banana	cytosol	45.93	45.66

Protein Annotations

EnsemblPlants:GSMUA_Achr3P20880_001	EnsemblPlants:GSMUA_Achr3T20880_001	EnsemblPlantsGene:GSMUA_Achr3G20880_001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF42	PFAM:PF01161
ScanProsite:PS01220	SEG:seg	SUPFAM:SSF49777	UniParc:UPI000295E601	UniProt:M0SGF4	MapMan:27.8.1

Description

Protein MOTHER of FT and TF 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20880_001]

Coordinates

chr3:-:21949435..21950419

Molecular Weight (calculated)

19126.2 Da

IEP (calculated)

9.814

GRAVY (calculated)

-0.190

Length

172 amino acids

Sequence
(BLAST)

001: MARYVDPLVV GRVIGDVVDL FVPTVSMTVR FGSKHVSNGC DIKPSMAANP PTVQIAGQQS DLYTLVMTDP DAPSPSDPTM REWLHWMMVN MPGGTFPSQG
101: EEVVPYMGPR LPLGIHRYVM VLFRQKSRFP GVTPPATRLN FNTRSFAAHH DLGLPVATVY FNSQKEPATR RR

Best Arabidopsis Sequence Match ( AT1G18100.1 )
(BLAST)

001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR

Arabidopsis Description

MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.