Factsheet for GSMUA_Achr2P19360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06420_001	Banana	cytosol	84.18	85.14
GSMUA_Achr5P06600_001	Banana	cytosol	83.62	84.57
GSMUA_Achr10P...	Banana	cytosol	66.67	67.82
GSMUA_Achr4P08540_001	Banana	cytosol	68.36	67.6
KRH06760	Soybean	cytosol	64.97	66.86
KRG94769	Soybean	cytosol	63.84	65.7
TraesCS7A01G355100.1	Wheat	cytosol	36.72	65.66
EER89918	Sorghum	cytosol	62.15	63.58
Os06t0552900-00	Rice	extracellular	62.15	63.58
Zm00001d043461_P001	Maize	cytosol	63.28	63.28
GSMUA_Achr1P17050_001	Banana	cytosol	61.02	62.43
TraesCS2A01G132300.1	Wheat	cytosol	61.02	62.43
TraesCS2D01G134200.1	Wheat	cytosol	61.02	62.43
Zm00001d038725_P001	Maize	cytosol	41.24	62.39
TraesCS2B01G154800.1	Wheat	cytosol	60.45	61.85
GSMUA_Achr2P19310_001	Banana	cytosol	61.02	61.71
Os05t0518000-00	Rice	cytosol	60.45	61.49
GSMUA_Achr11P...	Banana	cytosol	59.89	61.27
EES01474	Sorghum	cytosol	61.02	61.02
GSMUA_Achr10P...	Banana	cytosol	61.02	61.02
GSMUA_Achr2P20900_001	Banana	cytosol	59.32	60.34
KXG22359	Sorghum	cytosol	59.32	60.0
GSMUA_Achr10P...	Banana	cytosol	59.89	59.89
TraesCS6B01G191200.1	Wheat	cytosol	61.58	59.56
TraesCS5A01G546900.1	Wheat	cytosol	59.89	59.55
TraesCS7B01G272600.1	Wheat	cytosol	58.19	59.54
GSMUA_Achr3P03070_001	Banana	cytosol	58.19	59.54
TraesCS1D01G340800.1	Wheat	cytosol	59.89	59.22
GSMUA_Achr9P07900_001	Banana	cytosol	58.19	59.2
TraesCS6D01G152500.1	Wheat	cytosol	61.02	59.02
GSMUA_Achr10P...	Banana	cytosol	57.63	58.96
TraesCS1A01G338600.1	Wheat	cytosol	59.89	58.89
Zm00001d046300_P001	Maize	cytosol	62.15	58.82
HORVU4Hr1G090390.1	Barley	cytosol, nucleus, peroxisome	58.76	58.76
GSMUA_Achr3P02730_001	Banana	cytosol	59.32	58.66
TraesCSU01G130900.1	Wheat	cytosol	59.32	58.66
GSMUA_Achr5P20040_001	Banana	cytosol	57.06	58.38
TraesCS1B01G351100.1	Wheat	cytosol	59.32	58.33
TraesCSU01G130700.1	Wheat	cytosol	59.32	58.33
HORVU1Hr1G076430.1	Barley	cytosol	59.32	58.33
Zm00001d010752_P001	Maize	cytosol	57.63	58.29
GSMUA_Achr3P22720_001	Banana	cytosol	57.06	58.05
TraesCS6A01G160200.1	Wheat	cytosol	59.89	57.92
GSMUA_Achr2P05870_001	Banana	cytosol	60.45	57.84
GSMUA_Achr3P21510_001	Banana	cytosol	56.5	57.8
TraesCS4B01G380600.1	Wheat	cytosol	58.19	57.54
TraesCS4B01G379100.1	Wheat	cytosol	58.19	57.22
GSMUA_Achr8P07730_001	Banana	cytosol	56.5	57.14
HORVU2Hr1G023180.2	Barley	cytosol	59.89	56.99
Os01t0748800-00	Rice	cytosol	28.81	56.67
TraesCSU01G130800.1	Wheat	cytosol, nucleus, peroxisome	58.19	56.59
TraesCS5A01G546800.1	Wheat	cytosol	58.19	56.59
EES04803	Sorghum	cytosol	57.63	56.04
Zm00001d016253_P001	Maize	cytosol	58.19	55.98
GSMUA_Achr10P...	Banana	cytosol	54.24	55.17
TraesCS4B01G380500.1	Wheat	cytosol, nucleus, plastid	28.81	54.26
EES10600	Sorghum	cytosol	55.93	53.51
Zm00001d004010_P001	Maize	cytosol	30.51	51.92
GSMUA_Achr3P20880_001	Banana	cytosol	45.76	47.09
GSMUA_Achr6P09410_001	Banana	cytosol	44.07	45.35
GSMUA_AchrUn_...	Banana	cytosol	43.5	44.77
Os02t0232300-00	Rice	cytosol	44.63	42.7

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	InterPro:FT	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0008429	GO:GO:0009628	GO:GO:0009791
GO:GO:0009908	GO:GO:0009909	GO:GO:0048573	EnsemblPlantsGene:GSMUA_Achr2G19360_001	EnsemblPlants:GSMUA_Achr2P19360_001	EnsemblPlants:GSMUA_Achr2T19360_001
InterPro:IPR036610	UniProt:M0S9C7	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	UniParc:UPI0002956870

Description

Protein FLOWERING LOCUS T [Source:GMGC_GENE;Acc:GSMUA_Achr2G19360_001]

Coordinates

chr2:-:19463406..19464372

Molecular Weight (calculated)

20013.2 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.125

Length

177 amino acids

Sequence
(BLAST)

001: MSRDPLILGH VVGDVLDPFA RSVSLGVMYK NRLVINGSEF KPSAVVDKPL VQVGGDDLRI FYTLVMVDPD APNPSNPTLR EYLHWLVTDI PATTNASFGR
101: EIVCYECPRP AAGIHRVVFV LLRQMGRETV FTPELRHNFS TRRFAMEHYL VPVAATYYNC QREAGTGGRR FIRDDRC

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.