Factsheet for GSMUA_Achr2P19310_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	83.43	83.91
GSMUA_Achr10P...	Banana	cytosol	76.57	75.71
GSMUA_Achr4P08540_001	Banana	cytosol	73.71	72.07
GSMUA_Achr9P07900_001	Banana	cytosol	69.14	69.54
GSMUA_Achr2P20900_001	Banana	cytosol	66.29	66.67
GSMUA_Achr3P02730_001	Banana	cytosol	66.29	64.8
GSMUA_Achr10P...	Banana	cytosol	64.57	63.84
GSMUA_Achr5P06420_001	Banana	cytosol	63.43	63.43
GSMUA_Achr2P05870_001	Banana	cytosol	66.86	63.24
GSMUA_Achr5P06600_001	Banana	cytosol	62.86	62.86
GSMUA_Achr3P21510_001	Banana	cytosol	61.14	61.85
GSMUA_Achr2P19360_001	Banana	cytosol	61.71	61.02
GSMUA_Achr1P17050_001	Banana	cytosol	60.0	60.69
GSMUA_Achr11P...	Banana	cytosol	59.43	60.12
GSMUA_Achr3P03070_001	Banana	cytosol	58.29	58.96
GSMUA_Achr10P...	Banana	cytosol	58.29	58.62
GSMUA_Achr10P...	Banana	cytosol	57.71	58.38
GSMUA_Achr5P20040_001	Banana	cytosol	57.14	57.8
GSMUA_Achr8P07730_001	Banana	cytosol	57.14	57.14
GSMUA_Achr3P22720_001	Banana	cytosol	56.0	56.32
GSMUA_Achr3P20880_001	Banana	cytosol	50.86	51.74
GSMUA_Achr6P09410_001	Banana	cytosol	49.14	50.0
GSMUA_AchrUn_...	Banana	cytosol	48.0	48.84

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	InterPro:FT	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0008429	GO:GO:0009628	GO:GO:0009791
GO:GO:0009908	GO:GO:0009909	GO:GO:0048573	EnsemblPlantsGene:GSMUA_Achr2G19310_001	EnsemblPlants:GSMUA_Achr2P19310_001	EnsemblPlants:GSMUA_Achr2T19310_001
InterPro:IPR036610	UniProt:M0S9C2	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	UniParc:UPI000294AD2B

Description

Protein HEADING DATE 3A [Source:GMGC_GENE;Acc:GSMUA_Achr2G19310_001]

Coordinates

chr2:-:19414161..19416499

Molecular Weight (calculated)

19832.4 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.438

Length

175 amino acids

Sequence
(BLAST)

001: MQRDRDSLAV SRVIGDVLDP FTRSVHLRVI YSTREVTNGC EFKPSAVAEQ PRVEVGGSDF RSNYTLVMVD PDAPSPSDPT LREYLHWLIT DIPAKTEATY
101: GQEVVCYESP RPQLGIHRYV FVLFRQLPSR QAVDAPGWRQ NFNTRDFAEL YNLGSPVAAV YFNCQRESGS GGRRM

Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)

001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.