Factsheet for GSMUA_Achr10P10290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P02630_001
GSMUA_Achr1P02640_001
GSMUA_Achr2P03490_001
GSMUA_Achr2P11200_001
GSMUA_Achr4P05090_001
GSMUA_Achr4P29580_001
GSMUA_Achr5P11220_001
GSMUA_Achr5P11470_001
GSMUA_Achr5P17850_001
GSMUA_Achr5P23090_001
GSMUA_Achr9P21040_001
GSMUA_Achr9P24090_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03840.1	GSMUA_Achr1P02630_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr1P02640_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr2P03490_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr2P11200_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr4P05090_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr4P29580_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P11220_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P11470_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P17850_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr9P21040_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr9P24090_001	AT4G35900.1	16099980
AT5G03840.1	GSMUA_Achr5P23090_001	AT5G38480.1	23613197
AT5G03840.1	GSMUA_AchrUn_...	AT5G38480.1	23613197
AT5G03840.1	GSMUA_AchrUn_...	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07730_001	Banana	cytosol	87.36	86.86
GSMUA_Achr3P22720_001	Banana	cytosol	86.21	86.21
GSMUA_Achr3P03070_001	Banana	cytosol	80.46	80.92
GSMUA_Achr10P...	Banana	cytosol	79.31	79.77
HORVU2Hr1G072750.4	Barley	cytosol	78.74	79.19
TraesCS2B01G310700.1	Wheat	cytosol	78.74	79.19
TraesCSU01G202000.1	Wheat	cytosol	78.16	78.61
TraesCS2D01G292000.1	Wheat	cytosol	77.59	78.03
TraesCS4D01G305800.1	Wheat	cytosol	78.16	77.71
Os04t0411400-01	Rice	cytosol	77.01	77.46
EES12110	Sorghum	cytosol	76.44	76.88
TraesCS4A01G409200.1	Wheat	cytosol	77.01	76.57
Os02t0531600-01	Rice	cytosol	75.86	76.3
Zm00001d050649_P001	Maize	cytosol	75.86	76.3
TraesCS4B01G307600.1	Wheat	cytosol	76.44	76.0
EES06907	Sorghum	cytosol	75.29	75.72
Zm00001d025346_P001	Maize	cytosol	75.29	75.72
Zm00001d003804_P001	Maize	cytosol, extracellular	76.44	75.57
PGSC0003DMT400090526	Potato	cytosol	73.56	74.42
KRG96189	Soybean	cytosol	73.56	73.99
CDX77127	Canola	cytosol	48.85	73.91
VIT_08s0007g03450.t01	Wine grape	cytosol	72.99	73.84
AT2G27550.1	Thale cress	cytosol	73.56	73.14
PGSC0003DMT400018307	Potato	cytosol	62.07	72.97
Solyc09g009560.1.1	Tomato	cytosol	71.84	72.67
Bra034357.1-P	Field mustard	cytosol	72.99	72.57
CDY51916	Canola	cytosol	72.99	72.57
CDY30540	Canola	cytosol	72.99	72.57
CDY27416	Canola	cytosol	72.99	72.57
VIT_06s0080g00290.t01	Wine grape	cytosol	71.84	72.25
Bra012010.1-P	Field mustard	cytosol	72.41	72.0
CDY04503	Canola	cytosol	72.41	72.0
Bra000506.1-P	Field mustard	cytosol	72.41	72.0
CDX83272	Canola	cytosol	72.41	72.0
CDX71440	Canola	cytosol	71.84	71.43
KRH26623	Soybean	cytosol	59.77	71.23
CDY31183	Canola	cytosol	71.26	70.86
KRH32734	Soybean	cytosol	70.11	70.11
GSMUA_Achr11P...	Banana	cytosol	69.54	69.94
KRH30839	Soybean	cytosol	68.39	68.79
Solyc06g074350.2.1	Tomato	cytosol	68.97	68.57
GSMUA_Achr5P20040_001	Banana	cytosol	66.67	67.05
CDX80890	Canola	cytosol	66.09	66.09
CDY04899	Canola	cytosol	67.82	65.92
CDY14173	Canola	cytosol	67.82	65.92
Bra028815.1-P	Field mustard	cytosol	67.82	65.92
AT5G03840.1	Thale cress	cytosol	66.67	65.54
Bra005783.1-P	Field mustard	cytosol	66.67	65.54
Bra009508.1-P	Field mustard	cytosol	64.94	63.48
CDX70281	Canola	cytosol	64.94	63.48
KRH22689	Soybean	cytosol	60.34	63.25
CDY41432	Canola	cytosol	64.37	62.92
KRG89440	Soybean	cytosol	27.01	62.67
GSMUA_Achr2P19310_001	Banana	cytosol	58.62	58.29
GSMUA_Achr10P...	Banana	cytosol	58.05	58.05
GSMUA_Achr10P...	Banana	cytosol	58.05	57.06
GSMUA_Achr5P06600_001	Banana	cytosol	56.9	56.57
GSMUA_Achr5P06420_001	Banana	cytosol	56.32	56.0
GSMUA_Achr4P08540_001	Banana	cytosol	57.47	55.87
HORVU4Hr1G078770.1	Barley	cytosol	63.79	54.68
GSMUA_Achr9P07900_001	Banana	cytosol	54.6	54.6
GSMUA_Achr2P19360_001	Banana	cytosol	55.17	54.24
GSMUA_Achr3P20880_001	Banana	cytosol	52.3	52.91
GSMUA_Achr2P20900_001	Banana	cytosol	52.87	52.87
GSMUA_Achr6P09410_001	Banana	cytosol	51.72	52.33
GSMUA_Achr10P...	Banana	cytosol	52.87	51.98
KRH67905	Soybean	plastid	72.41	51.85
GSMUA_Achr3P21510_001	Banana	cytosol	51.15	51.45
GSMUA_Achr2P05870_001	Banana	cytosol	54.6	51.35
GSMUA_Achr3P02730_001	Banana	cytosol	52.3	50.84
GSMUA_AchrUn_...	Banana	cytosol	50.0	50.58
GSMUA_Achr1P17050_001	Banana	cytosol	47.7	47.98

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	GO:GO:0000003	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908
GO:GO:0009910	GO:GO:0009987	GO:GO:1903506	EnsemblPlantsGene:GSMUA_Achr10G10290_001	EnsemblPlants:GSMUA_Achr10P10290_001	EnsemblPlants:GSMUA_Achr10T10290_001
InterPro:IPR036610	UniProt:M0RH05	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF13	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	InterPro:TFL1-like
UniParc:UPI000294C463	:	:	:	:	:

Description

CEN-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10290_001]

Coordinates

chr10:-:19869995..19870789

Molecular Weight (calculated)

19538.3 Da

IEP (calculated)

8.714

GRAVY (calculated)

-0.326

Length

174 amino acids

Sequence
(BLAST)

001: MARLSDPLAV GRVIGEVIDS FHPSVRMTVT YNSSKLVCNG HEFYPSAVVS EPRVEVQCGD MRSFFTLVMT DPDAPGPSDP YLREHVHWIV TDIPGTPDAS
101: LGKEVVGYES PRPSIGIHRF VFVLFQQKRR QSVVAPPPSR DRFNPRRFAQ ENDLGLPVAA VYFNAQRETA ARRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.