Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018307 | Potato | cytosol | 83.43 | 98.65 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 76.57 | 77.46 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 74.86 | 75.72 |
| GSMUA_Achr10P... | Banana | cytosol | 74.29 | 75.14 |
| EES16646 | Sorghum | cytosol | 74.29 | 75.14 |
| Os11t0152500-00 | Rice | cytosol | 73.14 | 73.99 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 73.14 | 73.99 |
| EES09271 | Sorghum | cytosol | 73.14 | 73.99 |
| EES06907 | Sorghum | cytosol | 73.14 | 73.99 |
| KRH26623 | Soybean | cytosol | 61.71 | 73.97 |
| CDX77127 | Canola | cytosol | 48.57 | 73.91 |
| Zm00001d050649_P001 | Maize | cytosol | 72.57 | 73.41 |
| Os04t0411400-01 | Rice | cytosol | 72.57 | 73.41 |
| Os02t0531600-01 | Rice | cytosol | 72.57 | 73.41 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 72.0 | 72.83 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 72.0 | 72.83 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 72.0 | 72.83 |
| CDY30540 | Canola | cytosol | 72.57 | 72.57 |
| CDY51916 | Canola | cytosol | 72.57 | 72.57 |
| CDY27416 | Canola | cytosol | 72.57 | 72.57 |
| Bra034357.1-P | Field mustard | cytosol | 72.57 | 72.57 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 72.0 | 72.41 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 71.43 | 72.25 |
| Bra000506.1-P | Field mustard | cytosol | 72.0 | 72.0 |
| AT2G27550.1 | Thale cress | cytosol | 72.0 | 72.0 |
| CDX83272 | Canola | cytosol | 72.0 | 72.0 |
| TraesCSU01G202000.1 | Wheat | cytosol | 70.86 | 71.68 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 70.86 | 71.68 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 70.86 | 71.68 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 71.43 | 71.43 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 71.43 | 71.43 |
| Bra012010.1-P | Field mustard | cytosol | 71.43 | 71.43 |
| CDY04503 | Canola | cytosol | 71.43 | 71.43 |
| Zm00001d052537_P001 | Maize | cytosol | 72.0 | 71.19 |
| Zm00001d023420_P001 | Maize | cytosol | 70.29 | 71.1 |
| EES12110 | Sorghum | cytosol | 70.29 | 71.1 |
| CDX71440 | Canola | cytosol | 70.86 | 70.86 |
| CDY31183 | Canola | cytosol | 70.29 | 70.29 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 70.29 | 69.89 |
| Solyc09g009560.1.1 | Tomato | cytosol | 68.57 | 69.77 |
| Zm00001d025346_P001 | Maize | cytosol | 68.57 | 69.36 |
| Solyc03g026050.2.1 | Tomato | cytosol | 69.14 | 69.14 |
| GSMUA_Achr10P... | Banana | cytosol | 68.57 | 68.97 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 68.57 | 68.57 |
| KRH22689 | Soybean | cytosol | 64.57 | 68.07 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 68.0 | 68.0 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 68.0 | 68.0 |
| Solyc01g009560.1.1 | Tomato | cytosol | 66.86 | 66.86 |
| Zm00001d044705_P001 | Maize | extracellular | 73.14 | 62.14 |
| Solyc03g063100.1.1 | Tomato | cytosol | 56.57 | 55.93 |
| Solyc05g055660.1.1 | Tomato | cytosol | 43.43 | 54.29 |
| Solyc01g009580.1.1 | Tomato | plastid | 68.0 | 53.6 |
| Solyc11g008650.1.1 | Tomato | mitochondrion | 21.71 | 52.05 |
| Solyc05g053850.2.1 | Tomato | cytosol | 52.0 | 52.0 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 59.43 | 51.23 |
| Solyc03g119100.1.1 | Tomato | cytosol | 49.14 | 49.71 |
| Solyc11g008640.1.1 | Tomato | cytosol | 49.14 | 49.43 |
| Solyc11g008660.1.1 | Tomato | cytosol | 34.86 | 46.56 |
| Solyc02g079290.2.1 | Tomato | cytosol | 45.71 | 44.94 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009910 | GO:GO:0010228 | InterPro:IPR036610 | UniProt:K4C9F3 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | PFAM:PF01161 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF48 | SUPFAM:SSF49777 | EnsemblPlantsGene:Solyc06g074350.2 |
| EnsemblPlants:Solyc06g074350.2.1 | UniParc:UPI00027663C9 | : | : | : | : |
Description
Protein CENTRORADIALIS-like [Source:Projected from Arabidopsis thaliana (AT2G27550) UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
Coordinates
chr6:+:45971723..45973983
Molecular Weight (calculated)
19930.9 Da
IEP (calculated)
8.633
GRAVY (calculated)
-0.262
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKMCEPLV IGRVIGEVVD YFCPSVKMSV VYNNNKHVYN GHEFFPSSVT SKPRVEVHGG DLRSFFTLIM IDPDVLGPSD PYLREHLHWI VTDIPGTTDC
101: SFGREVVGYE MPRPNIGIHR FVFLLFKQKK RQTISSAPVS RDQFSSRKFS EENELGSPVA AVFFNCQRET AARRR
101: SFGREVVGYE MPRPNIGIHR FVFLLFKQKK RQTISSAPVS RDQFSSRKFS EENELGSPVA AVFFNCQRET AARRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.