Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g074350.2.1 | Tomato | cytosol | 98.65 | 83.43 |
| CDX77127 | Canola | cytosol | 58.78 | 75.65 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 80.41 | 68.79 |
| GSMUA_Achr3P03070_001 | Banana | cytosol | 78.38 | 67.05 |
| EES16646 | Sorghum | cytosol | 78.38 | 67.05 |
| GSMUA_Achr10P... | Banana | cytosol | 77.7 | 66.47 |
| EES09271 | Sorghum | cytosol | 77.7 | 66.47 |
| EES06907 | Sorghum | cytosol | 77.7 | 66.47 |
| Bra000506.1-P | Field mustard | cytosol | 78.38 | 66.29 |
| AT2G27550.1 | Thale cress | cytosol | 78.38 | 66.29 |
| CDY51916 | Canola | cytosol | 78.38 | 66.29 |
| CDY30540 | Canola | cytosol | 78.38 | 66.29 |
| CDY27416 | Canola | cytosol | 78.38 | 66.29 |
| CDX83272 | Canola | cytosol | 78.38 | 66.29 |
| Bra034357.1-P | Field mustard | cytosol | 78.38 | 66.29 |
| Zm00001d050649_P001 | Maize | cytosol | 77.03 | 65.9 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 77.03 | 65.9 |
| Os11t0152500-00 | Rice | cytosol | 77.03 | 65.9 |
| Os02t0531600-01 | Rice | cytosol | 77.03 | 65.9 |
| CDY04503 | Canola | cytosol | 77.7 | 65.71 |
| Bra012010.1-P | Field mustard | cytosol | 77.7 | 65.71 |
| Os04t0411400-01 | Rice | cytosol | 76.35 | 65.32 |
| CDX71440 | Canola | cytosol | 77.03 | 65.14 |
| KRH26623 | Soybean | cytosol | 64.19 | 65.07 |
| GSMUA_Achr3P22720_001 | Banana | cytosol | 76.35 | 64.94 |
| HORVU2Hr1G072750.4 | Barley | cytosol | 75.68 | 64.74 |
| TraesCS5D01G136300.1 | Wheat | cytosol | 75.68 | 64.74 |
| TraesCS5B01G127600.1 | Wheat | cytosol | 75.68 | 64.74 |
| TraesCS5A01G128600.1 | Wheat | cytosol | 75.68 | 64.74 |
| CDY31183 | Canola | cytosol | 76.35 | 64.57 |
| TraesCSU01G202000.1 | Wheat | cytosol | 75.0 | 64.16 |
| TraesCS2D01G292000.1 | Wheat | cytosol | 75.0 | 64.16 |
| TraesCS2B01G310700.1 | Wheat | cytosol | 75.0 | 64.16 |
| GSMUA_Achr8P07730_001 | Banana | cytosol | 75.68 | 64.0 |
| HORVU5Hr1G042230.13 | Barley | cytosol | 75.0 | 63.43 |
| Zm00001d052537_P001 | Maize | cytosol | 75.68 | 63.28 |
| EES12110 | Sorghum | cytosol | 73.65 | 63.01 |
| Zm00001d023420_P001 | Maize | cytosol | 73.65 | 63.01 |
| PGSC0003DMT400090526 | Potato | cytosol | 72.97 | 62.79 |
| TraesCS4D01G305800.1 | Wheat | cytosol | 73.65 | 62.29 |
| GSMUA_Achr10P... | Banana | cytosol | 72.97 | 62.07 |
| Zm00001d003804_P001 | Maize | cytosol, extracellular | 73.65 | 61.93 |
| TraesCS4A01G409200.1 | Wheat | cytosol | 72.97 | 61.71 |
| TraesCS4B01G307600.1 | Wheat | cytosol | 72.97 | 61.71 |
| Zm00001d025346_P001 | Maize | cytosol | 71.62 | 61.27 |
| KRH22689 | Soybean | cytosol | 66.89 | 59.64 |
| PGSC0003DMT400037143 | Potato | cytosol | 69.59 | 58.86 |
| PGSC0003DMT400030575 | Potato | cytosol | 68.92 | 58.29 |
| Zm00001d044705_P001 | Maize | extracellular | 77.03 | 55.34 |
| PGSC0003DMT400060057 | Potato | cytosol | 56.76 | 48.55 |
| PGSC0003DMT400030582 | Potato | cytosol | 28.38 | 47.19 |
| PGSC0003DMT400041725 | Potato | cytosol | 55.41 | 46.33 |
| PGSC0003DMT400041726 | Potato | cytosol | 52.7 | 44.83 |
| HORVU4Hr1G078770.1 | Barley | cytosol | 61.49 | 44.83 |
| PGSC0003DMT400014409 | Potato | cytosol | 47.97 | 41.04 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | ProteinID:ABC24691 | ProteinID:ABC24691.1 | EMBL:DQ307621 | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0010228 | InterPro:IPR036610 |
| UniProt:M1AAE7 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | EnsemblPlantsGene:PGSC0003DMG400007111 |
| PGSC:PGSC0003DMG400007111 | EnsemblPlants:PGSC0003DMT400018307 | ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF48 | InterPro:Phosphotidylethanolamine-bd_CS |
| SUPFAM:SSF49777 | UniParc:UPI0002965295 | : | : | : | : |
Description
Protein SELF-PRUNING [Source:PGSC_GENE;Acc:PGSC0003DMG400007111]
Coordinates
chr6:+:54943161..54945260
Molecular Weight (calculated)
16947.1 Da
IEP (calculated)
9.176
GRAVY (calculated)
-0.467
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVVYNNNKH VYNGHEFFPS SVTSKPRVEV HGGDLRSFFT LVMIDPDVPG PSDPYLREHL HWIVTDIPGT TDCSFGREVV GYEMPRPNIG IHRFVFLLFK
101: QKKRQTISSA PVSRDQFSSR KFSEENELGS PVAAVFFNCQ RETAARRR
101: QKKRQTISSA PVSRDQFSSR KFSEENELGS PVAAVFFNCQ RETAARRR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.