Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g026050.2.1 | Tomato | cytosol | 97.71 | 97.71 |
| PGSC0003DMT400030575 | Potato | cytosol | 84.57 | 84.57 |
| PGSC0003DMT400030582 | Potato | cytosol | 41.14 | 80.9 |
| KRH09103 | Soybean | cytosol | 78.86 | 80.23 |
| KRH38557 | Soybean | cytosol | 77.71 | 78.61 |
| VIT_16s0100g00700.t01 | Wine grape | cytosol | 75.43 | 76.3 |
| GSMUA_Achr11P... | Banana | cytosol | 74.29 | 75.14 |
| GSMUA_Achr5P20040_001 | Banana | cytosol | 72.57 | 73.41 |
| Bra010052.1-P | Field mustard | cytosol | 70.86 | 70.06 |
| PGSC0003DMT400018307 | Potato | cytosol | 58.86 | 69.59 |
| AT5G62040.1 | Thale cress | cytosol | 69.71 | 68.93 |
| PGSC0003DMT400090526 | Potato | cytosol | 62.86 | 63.95 |
| CDX86931 | Canola | cytosol | 71.43 | 60.39 |
| CDY00248 | Canola | cytosol | 70.86 | 59.9 |
| PGSC0003DMT400060057 | Potato | cytosol | 57.14 | 57.8 |
| PGSC0003DMT400041725 | Potato | cytosol | 53.71 | 53.11 |
| PGSC0003DMT400014409 | Potato | cytosol | 49.71 | 50.29 |
| PGSC0003DMT400041726 | Potato | cytosol | 47.43 | 47.7 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037143 | EnsemblPlantsGene:PGSC0003DMG400014322 | EntrezGene:102579229 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP |
| InterPro:PEBP-like_sf | InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF22 | PFAM:PF01161 |
| PGSC:PGSC0003DMG400014322 | RefSeq:XP_006353340.1 | ScanProsite:PS01220 | SUPFAM:SSF49777 | UniParc:UPI0002956A22 | UniProt:M1B4W5 |
| MapMan:27.8.1 | : | : | : | : | : |
Description
CEN 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400014322]
Coordinates
chr3:-:42491175..42492430
Molecular Weight (calculated)
19403.1 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.350
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGTCEPL AVGRVIGEVV DSFSPSVKMK VIYNGSKQVS NGHEIMPAVV ATQPRVEIGG EDMRSAYTLI MTDPDAPSPS DPYLREHLHW IVTDIPGTTD
101: ISFGREIVCY ETPKPVIGIH RYVFLLYKQR GRQTVKAPST RDQFNTRSFS AENGLGSPVA AVYFNAQRET AARRR
101: ISFGREIVCY ETPKPVIGIH RYVFLLYKQR GRQTVKAPST RDQFNTRSFS AENGLGSPVA AVYFNAQRET AARRR
001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
Arabidopsis Description
BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.