Factsheet for Bra010052.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G62040.1	Thale cress	cytosol	90.4	90.4
CDY00248	Canola	cytosol	100.0	85.51
CDX86931	Canola	cytosol	99.44	85.02
KRH09103	Soybean	cytosol	68.93	70.93
Solyc03g026050.2.1	Tomato	cytosol	70.06	70.86
PGSC0003DMT400037143	Potato	cytosol	70.06	70.86
VIT_16s0100g00700.t01	Wine grape	cytosol	68.36	69.94
KRH38557	Soybean	cytosol	67.8	69.36
GSMUA_Achr11P...	Banana	cytosol	67.8	69.36
PGSC0003DMT400030575	Potato	cytosol	67.8	68.57
GSMUA_Achr5P20040_001	Banana	cytosol	65.54	67.05
Solyc01g009560.1.1	Tomato	cytosol	65.54	66.29
PGSC0003DMT400030582	Potato	cytosol	31.64	62.92
Bra005783.1-P	Field mustard	cytosol	59.89	59.89
Bra009508.1-P	Field mustard	cytosol	59.89	59.55
Bra000506.1-P	Field mustard	cytosol	58.19	58.86
Bra034357.1-P	Field mustard	cytosol	58.19	58.86
Bra012010.1-P	Field mustard	cytosol	57.63	58.29
Bra004117.1-P	Field mustard	cytosol	57.63	58.29
Bra022475.1-P	Field mustard	cytosol	57.63	58.29
Bra028815.1-P	Field mustard	cytosol	58.76	58.1
Bra015710.1-P	Field mustard	mitochondrion	50.28	57.79
Solyc01g009580.1.1	Tomato	plastid	66.1	52.7
Bra031016.1-P	Field mustard	cytosol	49.15	50.29
Bra025930.1-P	Field mustard	cytosol	48.59	49.71

Protein Annotations

EnsemblPlants:Bra010052.1	EnsemblPlants:Bra010052.1-P	EnsemblPlantsGene:Bra010052	Gene3D:3.90.280.10	GO:GO:0000003	GO:GO:0007275
GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	GO:GO:0010228	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF22	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI000253F66A	UniProt:M4D0Q3	MapMan:27.8.1	:

Description

AT5G62040 (E=4e-092) | brother of FT and TFL1 protein (BFT)

Coordinates

chrA06:+:18894538..18895441

Molecular Weight (calculated)

20147.3 Da

IEP (calculated)

9.691

GRAVY (calculated)

-0.237

Length

177 amino acids

Sequence
(BLAST)

001: MSREIEPLIV GRVIGDVIEM FNPSVTMRVT YNSNTVVSNG HELAPSLLLS RPRVEIGGHD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREMVRYET PKPVIGIHRY AFVLFRQRGR QTVKAAPATR ECFNTRDFSA FFGLSLPVAA VYFNAQRETA PRRRPSY

Best Arabidopsis Sequence Match ( AT5G62040.1 )
(BLAST)

001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY

Arabidopsis Description

BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.