CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09103	Soybean	cytosol	97.11	97.67
VIT_16s0100g00700.t01	Wine grape	cytosol	80.35	80.35
GSMUA_Achr11P...	Banana	cytosol	78.03	78.03
Solyc03g026050.2.1	Tomato	cytosol	78.61	77.71
PGSC0003DMT400037143	Potato	cytosol	78.61	77.71
PGSC0003DMT400030575	Potato	cytosol	78.61	77.71
Solyc01g009560.1.1	Tomato	cytosol	76.3	75.43
PGSC0003DMT400030582	Potato	cytosol	38.73	75.28
GSMUA_Achr5P20040_001	Banana	cytosol	73.41	73.41
KRG96189	Soybean	cytosol	71.68	71.68
KRH30839	Soybean	cytosol	71.1	71.1
KRH32734	Soybean	cytosol	71.1	70.69
Bra010052.1-P	Field mustard	cytosol	69.36	67.8
AT5G62040.1	Thale cress	cytosol	68.79	67.23
KRH26623	Soybean	cytosol	54.91	65.07
KRG89440	Soybean	cytosol	27.75	64.0
Solyc01g009580.1.1	Tomato	plastid	80.35	62.61
KRH22689	Soybean	cytosol	56.65	59.04
KRH08450	Soybean	cytosol	59.54	58.52
CDX86931	Canola	cytosol	69.36	57.97
CDY00248	Canola	cytosol	69.36	57.97
KRH46900	Soybean	cytosol	29.48	57.95
KRH08453	Soybean	cytosol	58.96	57.95
KRH06761	Soybean	cytosol	58.38	57.71
KRG94768	Soybean	cytosol	56.07	55.43
KRH06760	Soybean	cytosol	54.91	55.23
KRG94769	Soybean	cytosol	54.91	55.23
KRH70116	Soybean	mitochondrion	20.23	54.69
KRH01790	Soybean	cytosol	55.49	54.55
KRH01791	Soybean	cytosol	54.34	54.34
KRH41796	Soybean	cytosol	30.64	53.54
KRH46899	Soybean	cytosol	53.76	53.14
KRH70112	Soybean	cytosol	35.84	52.99
KRH67905	Soybean	plastid	71.1	50.62
KRH60500	Soybean	endoplasmic reticulum	52.6	47.89
KRH01789	Soybean	cytosol	34.68	44.78
KRH45178	Soybean	cytosol	38.73	35.26

Protein Annotations

EMBL:ACUP02005849	EMBL:KJ608000	EnsemblPlants:KRH38557	EnsemblPlantsGene:GLYMA_09G143500	EntrezGene:100783608	Gene3D:3.90.280.10
InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362
PANTHER:PTHR11362:SF22	PFAM:PF01161	ProteinID:KRH38557	ProteinID:KRH38557.1	ScanProsite:PS01220	SUPFAM:SSF49777
UniParc:UPI000004D325	UniProt:I1L3B0	MapMan:27.8.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:35651928..35653676

Molecular Weight (calculated)

19533.5 Da

IEP (calculated)

9.774

GRAVY (calculated)

-0.392

Length

173 amino acids

Sequence
(BLAST)

001: MSRLMEQPLV VGRVIGEVVD IFSPSVRMNV TYSTKQVANG HELMPSTIMA KPRVEIGGDD MRTAYTLIMT DPDAPSPSDP HLREHLHWTV TDIPGTTDVS
101: FGKEIVGYES PKPVIGIHRY VFILFKQRGR QTVRPPSSRD HFNTRRFSEE NGLGLPVAVV YFNAQRETAA RRR

Best Arabidopsis Sequence Match ( AT2G27550.1 )
(BLAST)

001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR

Arabidopsis Description

CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.