Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09103 | Soybean | cytosol | 81.5 | 81.98 |
| KRH38557 | Soybean | cytosol | 80.35 | 80.35 |
| PGSC0003DMT400030575 | Potato | cytosol | 77.46 | 76.57 |
| Solyc03g026050.2.1 | Tomato | cytosol | 76.88 | 76.0 |
| PGSC0003DMT400037143 | Potato | cytosol | 76.3 | 75.43 |
| Solyc01g009560.1.1 | Tomato | cytosol | 75.72 | 74.86 |
| GSMUA_Achr11P... | Banana | cytosol | 73.41 | 73.41 |
| GSMUA_Achr5P20040_001 | Banana | cytosol | 71.68 | 71.68 |
| PGSC0003DMT400030582 | Potato | cytosol | 36.42 | 70.79 |
| VIT_06s0080g00290.t01 | Wine grape | cytosol | 70.52 | 70.52 |
| VIT_08s0007g03450.t01 | Wine grape | cytosol | 69.94 | 70.35 |
| Bra010052.1-P | Field mustard | cytosol | 69.94 | 68.36 |
| AT5G62040.1 | Thale cress | cytosol | 68.21 | 66.67 |
| Solyc01g009580.1.1 | Tomato | plastid | 78.03 | 60.81 |
| CDX86931 | Canola | cytosol | 70.52 | 58.94 |
| CDY00248 | Canola | cytosol | 69.94 | 58.45 |
| VIT_17s0000g02630.t01 | Wine grape | cytosol | 52.02 | 52.33 |
| VIT_00s0203g00080.t01 | Wine grape | cytosol | 49.71 | 49.14 |
Protein Annotations
| EntrezGene:100233010 | wikigene:100233010 | MapMan:27.8.1 | Gene3D:3.90.280.10 | UniProt:A4GG73 | ProteinID:ABI99468 |
| ProteinID:ABI99468.1 | ProteinID:CBI31818 | ProteinID:CBI31818.3 | EMBL:DQ871593 | EMBL:FN596000 | InterPro:IPR036610 |
| RefSeq:NP_001267933.1 | InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | ScanProsite:PS01220 |
| PANTHER:PTHR11362 | PANTHER:PTHR11362:SF22 | InterPro:Phosphotidylethanolamine-bd_CS | SUPFAM:SSF49777 | EntrezGene:TFL1C | wikigene:TFL1C |
| UniParc:UPI0000F57C49 | ArrayExpress:VIT_16s0100g00700 | EnsemblPlantsGene:VIT_16s0100g00700 | EnsemblPlants:VIT_16s0100g00700.t01 | unigene:Vvi.8909 | SEG:seg |
Description
TFL1C protein [Source:UniProtKB/TrEMBL;Acc:A4GG73]
Coordinates
chr16:-:16172982..16174046
Molecular Weight (calculated)
19081.8 Da
IEP (calculated)
9.338
GRAVY (calculated)
-0.390
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRNMEPLSV GRVVGDVVDG FTPSVKMSVT YNSNKQVANG HELMPSVVTA KPRVEVGGED LRAAYTLIMT DPDAPSPSDP YLKEHLHWIV ADIPGTTDAS
101: FGKEIVSYEP PKPVIGIHRY AFILFKQRGR ETVMPPASRD HFNTRKFAED NGLGSPVAAV YFNAQRPTAA RRR
101: FGKEIVSYEP PKPVIGIHRY AFILFKQRGR ETVMPPASRD HFNTRKFAED NGLGSPVAAV YFNAQRPTAA RRR
001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
Arabidopsis Description
BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.