Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030575 | Potato | cytosol | 95.51 | 48.57 |
| Solyc01g009560.1.1 | Tomato | cytosol | 88.76 | 45.14 |
| PGSC0003DMT400037143 | Potato | cytosol | 80.9 | 41.14 |
| KRH09103 | Soybean | cytosol | 76.4 | 39.53 |
| KRH38557 | Soybean | cytosol | 75.28 | 38.73 |
| Solyc01g009580.1.1 | Tomato | plastid | 93.26 | 37.39 |
| VIT_16s0100g00700.t01 | Wine grape | cytosol | 70.79 | 36.42 |
| GSMUA_Achr11P... | Banana | cytosol | 65.17 | 33.53 |
| PGSC0003DMT400090526 | Potato | cytosol | 61.8 | 31.98 |
| Bra010052.1-P | Field mustard | cytosol | 62.92 | 31.64 |
| AT5G62040.1 | Thale cress | cytosol | 62.92 | 31.64 |
| GSMUA_Achr5P20040_001 | Banana | cytosol | 60.67 | 31.21 |
| PGSC0003DMT400018307 | Potato | cytosol | 47.19 | 28.38 |
| PGSC0003DMT400060057 | Potato | cytosol | 52.81 | 27.17 |
| CDY00248 | Canola | cytosol | 62.92 | 27.05 |
| CDX86931 | Canola | cytosol | 61.8 | 26.57 |
| PGSC0003DMT400014409 | Potato | cytosol | 49.44 | 25.43 |
| PGSC0003DMT400041725 | Potato | cytosol | 46.07 | 23.16 |
| PGSC0003DMT400041726 | Potato | cytosol | 41.57 | 21.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400030582 | EnsemblPlantsGene:PGSC0003DMG400011709 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP-like_sf | InterPro:PEBP_euk |
| InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF22 | PGSC:PGSC0003DMG400011709 | ScanProsite:PS01220 | SUPFAM:SSF49777 |
| UniParc:UPI00029511FF | UniProt:M1AUG2 | MapMan:27.8.1 | : | : | : |
Description
CEN 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400011709]
Coordinates
chr1:+:7505844..7506641
Molecular Weight (calculated)
10092.2 Da
IEP (calculated)
5.063
GRAVY (calculated)
-0.293
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MSCRDIEPLV VERVIGEVVD RFNPSVKMNV IYNGSKQVFN GHELMPPLIA SKPRVEIGGE DMRSAYTLIM TDPDVPGPSD PYLREHLHW
001: MENMGTRVIE PLIMGRVVGD VLDFFTPTTK MNVSYNKKQV SNGHELFPSS VSSKPRVEIH GGDLRSFFTL VMIDPDVPGP SDPFLKEHLH WIVTNIPGTT
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
101: DATFGKEVVS YELPRPSIGI HRFVFVLFRQ KQRRVIFPNI PSRDHFNTRK FAVEYDLGLP VAAVFFNAQR ETAARKR
Arabidopsis Description
TFL1Protein TERMINAL FLOWER 1 [Source:UniProtKB/Swiss-Prot;Acc:P93003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.